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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4731 and GFF4732 are separated by 415 nucleotides
GFF4732 and GFF4733 are separated by 79 nucleotides
GFF4733 and GFF4734 are separated by 88 nucleotides
GFF4734 and GFF4735 overlap by 4 nucleotides
GFF4731 - hypothetical protein, at 4,729,861 to 4,731,582
GFF4731
GFF4732 - hypothetical protein, at 4,731,998 to 4,732,207
GFF4732
GFF4733 - Transcriptional regulator, AcrR family, at 4,732,287 to 4,732,910
GFF4733
GFF4734 - hypothetical protein, at 4,732,999 to 4,734,369
GFF4734
GFF4735 - HlyD family secretion protein, at 4,734,366 to 4,735,403
GFF4735
Group
Condition
GFF4731
GFF4732
GFF4733
GFF4734
GFF4735
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-1.0
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.6
-0.0
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.2
+0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.2
+0.3
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.0
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.4
+0.4
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.1
+0.1
+0.0
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.0
+0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
-0.0
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.1
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.0
+0.1
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
+0.1
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.1
+0.2
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.4
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.4
+0.2
+0.2
+0.4
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