Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4729 and GFF4730 are separated by 3 nucleotidesGFF4730 and GFF4731 are separated by 4 nucleotidesGFF4731 and GFF4732 are separated by 48 nucleotidesGFF4732 and GFF4733 are separated by 9 nucleotides GFF4729 - no description, at 92,292 to 92,435 GFF4729 GFF4730 - hypothetical protein, at 92,439 to 94,712 GFF4730 GFF4731 - Assimilatory nitrate reductase large subunit (EC 1.7.99.4), at 94,717 to 97,509 GFF4731 GFF4732 - Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4), at 97,558 to 97,953 GFF4732 GFF4733 - Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family), at 97,963 to 98,754 GFF4733
Group Condition GFF4729 GFF4730 GFF4731 GFF4732 GFF4733
complex community Community=guar; Passage=4 -0.5 +0.2 -0.1 N.D. -1.3
complex community Community=arabino-guar; Passage=4 -0.5 +0.0 +0.7 N.D. -1.4
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.3 +0.0 N.D. -0.4
phage phage_bap4 -0.3 +0.0 +0.0 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 -0.0 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.1 -0.1 N.D. -0.1
complex community Community=arabino-guar; Passage=4 +0.3 -0.3 +0.0 N.D. -0.6
phage phage_bap4 -0.2 -0.1 -0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 -0.2 +0.1 N.D. -0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.3 N.D. -1.1
no phage control no phage control -0.2 +0.0 +0.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.1 N.D. -0.5
complex community Community=Locust bean gum; Passage=4 -0.3 +0.1 -0.3 N.D. +0.3
no phage control no phage control +0.1 -0.0 +0.1 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 -0.2 +0.2 N.D. +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.0 +0.3 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.0 +0.2 N.D. +0.1
complex community Community=guar; Passage=4 +0.2 +0.2 -0.1 N.D. -0.2
complex community Community=guar; Passage=4 -0.5 +0.3 -0.0 N.D. +0.3
complex community Community=guar; Passage=4 +0.5 +0.3 +0.0 N.D. -0.6
complex community Community=arabino-guar; Passage=4 +0.3 -0.5 +0.1 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 +0.0 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 +0.1 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.0 +0.1 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 -0.1 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.0 +0.1 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.0 N.D. +0.5
complex community Community=Locust bean gum; Passage=4 -0.2 +0.4 +0.3 N.D. +0.1
complex community Community=Kojac gum; Passage=1 +0.4 +0.2 +0.1 N.D. -0.0
complex community Community=Kojac gum; Passage=4 +0.1 +0.0 +0.2 N.D. +0.3
remove
GFF4729
plot		 remove
GFF4730
plot		 remove
GFF4731		 remove
GFF4732
plot		 remove
GFF4733
plot