Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF4724 and GFF4725 are separated by 233 nucleotidesGFF4725 and GFF4726 are separated by 61 nucleotidesGFF4726 and GFF4727 are separated by 181 nucleotidesGFF4727 and GFF4728 overlap by 4 nucleotides GFF4724 - [NiFe] hydrogenase metallocenter assembly protein HypE, at 32,256 to 33,266 GFF4724 GFF4725 - Formate hydrogenlyase transcriptional activator, at 33,500 to 35,563 GFF4725 GFF4726 - FIG00638716: hypothetical protein, at 35,625 to 35,969 GFF4726 GFF4727 - Manganese ABC transporter, periplasmic-binding protein SitA, at 36,151 to 37,068 GFF4727 GFF4728 - Manganese ABC transporter, ATP-binding protein SitB, at 37,065 to 37,886 GFF4728
Group Condition GFF4724 GFF4725 GFF4726 GFF4727 GFF4728
phage Br60_phage 15 MOI -0.4 -0.0 -0.2 -0.2 -0.4
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.2 +0.1 -0.2 +0.2 -0.7
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI -0.0 +0.1 -0.5 +0.2 -0.6
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.1 +0.2 -0.5 -0.2 -0.1
phage LB_plus_SM_buffer with 6F2_phage 0.001875 MOI +0.1 -0.1 -0.2 -0.0 -0.4
phage LB_plus_SM_buffer with 6F2_phage 0.01875 MOI +0.1 -0.1 -0.5 -0.2 -0.0
phage 6F2_phage 15 MOI -0.3 -0.2 -0.2 -0.0 +0.1
phage 6F2_phage 15 MOI +0.1 -0.1 +0.1 -0.3 -0.3
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI +0.4 -0.2 -0.7 +0.4 -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.1 +0.1 -0.2 +0.2 -0.3
phage phi19h1_phage 15 MOI -0.1 -0.2 +0.3 -0.0 -0.3
lb_plus_sm_buffer LB_plus_SM_buffer -0.0 -0.1 -0.4 +0.0 +0.2
phage Br60_phage 15 MOI -0.2 -0.1 +0.5 -0.2 -0.2
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.1 +0.1 -0.3 -0.3 +0.3
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI -0.2 +0.0 -0.3 +0.1 +0.3
lb_plus_sm_buffer LB_plus_SM_buffer +0.2 +0.0 -0.2 +0.2 -0.2
nophagecontrol No phage control +0.1 +0.1 +0.3 -0.3 -0.1
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.2 +0.2 -0.0 +0.1 -0.4
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.1 -0.3 -0.2 +0.6 -0.1
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI +0.0 -0.1 +0.5 -0.2 +0.2
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI -0.3 +0.0 +0.1 +0.0 +0.6
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.1 +0.1 -0.3 -0.3 +0.8
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -0.1 -0.3 -0.1 +0.8 +0.4
phage Ffm_phage 10 MOI; agar plate assay +0.3 +0.1 +0.2 +0.4 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.1 +0.5 +0.2 +0.3 -0.1
phage 6H2_phage 10 MOI; agar plate assay -0.0 -0.1 +0.6 +0.1 +0.5
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.9 +0.1 -0.3 +0.3 +0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.7 +0.3 +0.1 +0.5 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.6 +0.2 +0.2 +0.3 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.6 +0.4 +0.4 +0.4 +0.3
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