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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4722 and GFF4723 are separated by 46 nucleotides
GFF4723 and GFF4724 are separated by 87 nucleotides
GFF4724 and GFF4725 overlap by 4 nucleotides
GFF4725 and GFF4726 are separated by 113 nucleotides
GFF4722 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 83,619 to 84,887
GFF4722
GFF4723 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 84,934 to 86,052
GFF4723
GFF4724 - Uroporphyrinogen-III methyltransferase (EC 2.1.1.107), at 86,140 to 86,949
GFF4724
GFF4725 - Anthranilate phosphoribosyltransferase-like protein, at 86,946 to 87,851
GFF4725
GFF4726 - hypothetical protein, at 87,965 to 90,379
GFF4726
Group
Condition
GFF4722
GFF4723
GFF4724
GFF4725
GFF4726
complex community
Community=arabino-guar; Passage=4
-0.1
-0.1
-5.2
-0.9
+0.2
complex community
Community=arabino-guar; Passage=4
+0.1
+0.4
-4.8
-1.3
+0.0
complex community
Community=guar; Passage=4
-0.4
+0.1
-4.5
-0.6
-0.1
complex community
Community=guar; Passage=4
+0.0
+0.2
-4.4
-1.4
+0.2
complex community
Community=arabino-guar; Passage=4
-0.1
+0.2
-4.9
-0.6
+0.1
complex community
Community=guar; Passage=4
+0.1
+0.4
-5.0
-0.6
-0.0
complex community
Community=guar; Passage=4
-0.2
+0.2
-4.7
-0.1
+0.2
complex community
Community=Locust bean gum; Passage=4
-0.3
+0.3
-4.2
-0.4
+0.1
complex community
Community=arabino-guar; Passage=4
+0.1
+0.2
-4.9
-0.0
+0.2
complex community
Community=Kojac gum; Passage=4
-0.0
-0.1
-4.4
+0.0
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
+0.0
-3.5
-0.6
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.0
-0.2
-4.0
-0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.1
-2.7
-1.5
-0.0
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.1
-4.1
+0.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.0
-3.2
-0.6
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.1
-2.8
-1.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.1
-2.8
-0.7
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.2
-3.2
-0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.1
-2.8
-0.7
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
-0.1
-2.3
-1.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.1
-2.9
-0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.0
-2.9
-0.6
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.0
-2.3
-0.9
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.0
-2.4
-0.8
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.1
-2.1
-0.8
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
+0.0
-2.8
-0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
+0.0
-2.5
-0.5
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.1
-2.5
-0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
-0.1
-1.7
-1.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.1
-2.2
-0.3
-0.1
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