Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4719 and GFF4720 overlap by 4 nucleotidesGFF4720 and GFF4721 are separated by 150 nucleotidesGFF4721 and GFF4722 are separated by 16 nucleotidesGFF4722 and GFF4723 are separated by 46 nucleotides GFF4719 - hypothetical protein, at 80,979 to 81,647 GFF4719 GFF4720 - Putrescine transport system permease protein potI, at 81,644 to 82,534 GFF4720 GFF4721 - ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron), at 82,685 to 83,602 GFF4721 GFF4722 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 83,619 to 84,887 GFF4722 GFF4723 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 84,934 to 86,052 GFF4723
Group Condition GFF4719 GFF4720 GFF4721 GFF4722 GFF4723
complex community Community=guar; Passage=4 -1.6 +0.1 -0.1 -0.2 +0.2
complex community Community=guar; Passage=4 -0.8 -0.0 -0.2 -0.4 +0.1
complex community Community=guar; Passage=4 -0.6 +0.1 -0.6 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 +0.0 -0.2 +0.0 -0.1
complex community Community=Kojac gum; Passage=1 -0.5 -0.0 -0.1 -0.0 -0.1
complex community Community=Kojac gum; Passage=4 +0.3 -0.6 -0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.2 -0.2 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 -0.3 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 -0.1 +0.0 -0.2 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.3 +0.1 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 -0.2 +0.3 -0.3 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.1 -0.1 +0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.2 -0.1 +0.0
complex community Community=Locust bean gum; Passage=1 -0.2 -0.2 +0.1 -0.0 +0.0
no phage control no phage control -0.2 -0.0 +0.1 +0.0 -0.1
phage phage_bap4 +0.1 +0.1 -0.2 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.6 -0.6 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.2 +0.1 -0.3 +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.5 -0.3 +0.0 -0.2
no phage control no phage control -0.1 +0.1 +0.0 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.0 -0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.1 +0.1 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 -1.0 +0.6 +0.0 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.2 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 +0.1 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.3 -0.1 +0.0 +0.1
phage phage_bap4 +0.3 +0.0 +0.1 -0.1 +0.1
complex community Community=guar; Passage=4 -0.7 +0.2 +0.5 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 -0.1 +0.5 +0.1 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 +0.7 -0.2 +0.1 +0.2
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