Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_24125	PS417_24130	PS417_24135	PS417_24140	PS417_24145
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	-0.5	-2.2	+0.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.2	-0.8	-0.7	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	+0.2	-1.4	-0.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	-0.4	-0.4	-0.4	-0.1
root	root sample 6; outgrowth in LB	-0.1	-0.5	-1.7	+0.3	-0.2
stress	methylglyoxal 0.032 vol%	-0.9	-0.1	-1.3	+0.2	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	+0.1	-1.9	-0.2	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	+0.2	-1.5	+0.1	-0.2
carbon source	L-Valine (C)	-0.7	+0.3	-1.4	+0.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	+0.2	-1.1	-0.2	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.0	-1.3	-0.3	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.4	+0.4	-0.7	+0.0	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4	+0.0	-1.3	+0.2	-0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	+0.4	-0.9	-0.1	-0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.8	+0.2	-0.6	-0.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.3	+0.2	-1.4	-0.0	+0.4
phage	P. simiae ORA MOI 0.1	-1.4	+0.3	-0.3	+0.1	+0.3
phage	P. simiae ORA MOI 0.1	-1.5	+0.0	+0.5	+0.1	+0.0
liquid stress	Scopoletin 3 mM; liquid stress	-0.1	+0.2	-1.4	+0.2	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7	-0.5	+0.8	-0.1	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2	+0.2	+1.1	-0.2	-0.2
supernatant control	Vogels_fungal_media 0.1X	-1.3	+0.3	+0.2	+0.2	+0.3
seeds	Growth on radish seeds for 72 hours	-0.8	-0.5	+1.0	-0.1	+0.0
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.8	-0.1	+0.8	-0.2	+0.2
phage	JP1 MOI 0.1	+0.5	-0.1	-1.0	+0.3	+0.3
carbon source	L-Valine (C)	-1.2	-0.0	+1.4	+0.1	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.4	+0.5	+1.6	+0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2	-0.4	+0.4	-0.2	-0.0
supernatant control	Vogels_fungal_media 0.1X	+0.5	-0.2	+1.3	-0.2	+0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1	-0.1	+2.7	+0.2	+0.1