Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4704 and GFF4705 overlap by 1 nucleotidesGFF4705 and GFF4706 are separated by 31 nucleotidesGFF4706 and GFF4707 overlap by 4 nucleotidesGFF4707 and GFF4708 overlap by 20 nucleotides GFF4704 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 68,060 to 68,884 GFF4704 GFF4705 - Monooxygenase, flavin-binding family, at 68,884 to 70,212 GFF4705 GFF4706 - Na(+) dependent transporter,Sodium Bile acid symporter family, at 70,244 to 71,146 GFF4706 GFF4707 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 71,143 to 72,144 GFF4707 GFF4708 - Transcriptional regulator RSp1267, LysR family, at 72,125 to 73,036 GFF4708
Group Condition GFF4704 GFF4705 GFF4706 GFF4707 GFF4708
complex community Community=Locust bean gum; Passage=4 -0.0 -0.1 -1.1 -0.6 -0.2
complex community Community=Kojac gum; Passage=4 +0.2 +0.2 -0.6 -0.1 -1.2
complex community Community=guar; Passage=4 +0.1 -0.1 -0.9 +0.5 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 -0.1 +0.2 -1.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.0 -0.4 +0.1 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 -0.4 +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 -0.5 -0.0 -0.4
complex community Community=Locust bean gum; Passage=1 +0.3 +0.0 -0.3 +0.0 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 -0.0 -0.0 -0.6
phage phage_bap4 -0.1 +0.0 -0.3 +0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.3 +0.1 -0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.0 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 -0.3 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.0 +0.1 +0.1 -0.8
no phage control no phage control -0.1 -0.0 +0.3 +0.2 -0.8
complex community Community=Locust bean gum; Passage=4 -0.0 +0.5 +0.5 -0.0 -1.4
complex community Community=Locust bean gum; Passage=4 +0.2 +0.2 +0.1 -0.0 -1.0
complex community Community=guar; Passage=4 -0.4 +0.1 -0.3 -0.0 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 -0.1 +0.1 -0.3 -0.4
phage phage_bap4 -0.0 +0.1 -0.1 +0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.2 -0.3 +0.3
complex community Community=arabino-guar; Passage=4 +0.4 +0.0 -0.2 -0.3 +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.2 -0.1 +0.4 +0.2
complex community Community=guar; Passage=4 +0.3 -0.4 -0.0 -0.3 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 -0.3 +0.4 +0.4
phage phage_bap4 +0.2 +0.1 -0.2 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 -0.2 -0.1 +0.7
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 +0.1 +0.3 +1.3
complex community Community=arabino-guar; Passage=4 +0.9 +0.2 +0.1 -0.2 +1.1
complex community Community=guar; Passage=4 +0.3 +0.1 -0.1 +0.6 +1.2
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