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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4703 and GFF4704 are separated by 64 nucleotides
GFF4704 and GFF4705 overlap by 4 nucleotides
GFF4705 and GFF4706 are separated by 574 nucleotides
GFF4706 and GFF4707 are separated by 91 nucleotides
GFF4703 - Transcriptional regulator, LysR family, at 4,704,754 to 4,705,635
GFF4703
GFF4704 - hypothetical protein, at 4,705,700 to 4,706,557
GFF4704
GFF4705 - Haloacid dehalogenase, type II (EC 3.8.1.2), at 4,706,554 to 4,707,273
GFF4705
GFF4706 - Transcriptional regulator, LysR family, at 4,707,848 to 4,708,777
GFF4706
GFF4707 - Zinc-type alcohol dehydrogenase-like protein, at 4,708,869 to 4,709,882
GFF4707
Group
Condition
GFF4703
GFF4704
GFF4705
GFF4706
GFF4707
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.0
-0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.3
+0.3
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
+0.0
+0.1
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.3
+0.1
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.2
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.2
+0.4
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.3
+0.3
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.3
+0.6
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.2
+0.4
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.2
+0.2
+0.5
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.5
+0.3
+0.2
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.3
+0.5
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.3
+0.5
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.3
+0.3
+0.5
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.4
+0.2
+0.5
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
+0.4
+0.3
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.5
+0.6
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.4
+0.4
+0.6
+0.4
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