Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4697 and GFF4698 are separated by 59 nucleotidesGFF4698 and GFF4699 are separated by 189 nucleotidesGFF4699 and GFF4700 overlap by 1 nucleotidesGFF4700 and GFF4701 overlap by 4 nucleotides GFF4697 - TldE protein, part of TldE/TldD proteolytic complex, at 60,152 to 61,522 GFF4697 GFF4698 - Transcriptional regulator of various polyols utilization, AraC family, at 61,582 to 62,532 GFF4698 GFF4699 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 62,722 to 64,008 GFF4699 GFF4700 - Various polyols ABC transporter, permease protein 1, at 64,008 to 64,892 GFF4700 GFF4701 - Various polyols ABC transporter, permease protein 2, at 64,889 to 65,731 GFF4701
Group Condition GFF4697 GFF4698 GFF4699 GFF4700 GFF4701
complex community Community=guar; Passage=4 -0.5 -0.3 +0.1 -0.0 -0.2
complex community Community=arabino-guar; Passage=4 -0.7 +0.2 -0.1 -0.4 +0.2
complex community Community=arabino-guar; Passage=4 -0.5 -0.1 -0.1 -0.1 -0.0
complex community Community=guar; Passage=4 -0.6 +0.2 -0.2 -0.0 -0.2
complex community Community=guar; Passage=4 -0.4 +0.2 +0.1 -0.4 -0.3
complex community Community=arabino-guar; Passage=4 -0.5 -0.0 -0.0 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.6 +0.2 +0.1 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.3 -0.1 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 +0.5 -0.1 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 -0.1 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.1 -0.0 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.3 -0.1 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.1 +0.1 -0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 +0.5 +0.3 -0.5 -0.0
complex community Community=guar; Passage=4 -0.2 -0.1 +0.1 +0.2 -0.1
complex community Community=Kojac gum; Passage=4 -0.2 -0.1 +0.3 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.3 +0.0 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.2 +0.0 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 +0.1 +0.1 -0.1
no phage control no phage control +0.0 -0.2 +0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 -0.1 +0.1 -0.1
complex community Community=Locust bean gum; Passage=1 +0.1 +0.2 +0.0 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.0 -0.1 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.2 +0.1 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.2 -0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 +0.0 +0.1 -0.2
phage phage_bap4 +0.1 -0.0 -0.1 +0.1 +0.2
phage phage_bap4 +0.2 -0.0 -0.0 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.5 +0.3 +0.3 +0.1 +0.3
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