Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4684 and GFF4685 are separated by 4 nucleotidesGFF4685 and GFF4686 overlap by 4 nucleotidesGFF4686 and GFF4687 are separated by 159 nucleotidesGFF4687 and GFF4688 are separated by 95 nucleotides GFF4684 - Na+/H+ antiporter, at 44,102 to 45,355 GFF4684 GFF4685 - Copper sensory histidine kinase CusS, at 45,360 to 46,688 GFF4685 GFF4686 - Copper-sensing two-component system response regulator CusR, at 46,685 to 47,362 GFF4686 GFF4687 - no description, at 47,522 to 47,896 GFF4687 GFF4688 - Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC, at 47,992 to 49,356 GFF4688
Group Condition GFF4684 GFF4685 GFF4686 GFF4687 GFF4688
complex community Community=Locust bean gum; Passage=4 -0.8 -0.1 -0.4 -0.4 -0.7
complex community Community=guar; Passage=4 -0.8 -0.5 +0.1 -0.2 -0.3
complex community Community=Locust bean gum; Passage=1 -0.2 -0.3 -0.3 -0.7 -0.2
complex community Community=Kojac gum; Passage=1 -0.7 -0.2 -0.1 -0.3 -0.2
complex community Community=Locust bean gum; Passage=4 -0.2 -0.5 -0.4 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.4 -0.2 -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.0 -0.0 +0.7 -2.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 -0.3 -0.2 -0.5
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 -0.5 +0.3 -1.0
complex community Community=guar; Passage=4 -0.4 +0.1 -0.5 +0.6 -1.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 -0.2 -0.1 -0.3 -0.3
complex community Community=arabino-guar; Passage=4 -0.0 -0.3 +0.2 +0.5 -1.5
complex community Community=guar; Passage=4 -0.6 +0.3 -0.2 -0.0 -0.6
no phage control no phage control -0.4 -0.3 -0.1 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.0 -0.3 -0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.1 -0.0 +0.0 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.2 +0.2 -0.3 -0.3
complex community Community=guar; Passage=4 -0.2 -0.2 -0.2 +0.5 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.1 -0.1 -0.4 -0.2
phage phage_bap4 -0.4 +0.1 +0.0 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.2 -0.0 -0.2 -0.5
complex community Community=Kojac gum; Passage=4 +0.6 -0.2 -0.4 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 -0.0 -0.3 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 -0.3 -0.4 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.0 -0.3 -0.4 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.4 -0.2 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 -0.1 -0.2 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.8 +0.2 -0.3 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 -0.0 +0.3 +0.6
complex community Community=arabino-guar; Passage=4 +1.2 -0.3 -0.1 +0.0 -0.1
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