Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4678 and GFF4679 overlap by 1 nucleotidesGFF4679 and GFF4680 are separated by 117 nucleotidesGFF4680 and GFF4681 are separated by 76 nucleotidesGFF4681 and GFF4682 are separated by 28 nucleotides GFF4678 - FIG00348290: hypothetical protein, at 36,113 to 38,359 GFF4678 GFF4679 - Inositol-1-monophosphatase (EC 3.1.3.25), at 38,359 to 39,423 GFF4679 GFF4680 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200), at 39,541 to 40,281 GFF4680 GFF4681 - Serine acetyltransferase (EC 2.3.1.30), at 40,358 to 41,131 GFF4681 GFF4682 - Transcriptional regulator, MerR family, at 41,160 to 41,630 GFF4682
Group Condition GFF4678 GFF4679 GFF4680 GFF4681 GFF4682
complex community Community=arabino-guar; Passage=4 -0.2 -1.3 -0.7 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.2 -2.1 N.D. +0.1
complex community Community=guar; Passage=4 +0.2 -0.4 -1.3 N.D. +0.3
complex community Community=Locust bean gum; Passage=4 +0.5 -0.3 -1.7 N.D. +0.3
complex community Community=guar; Passage=4 +0.1 -0.9 +0.0 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.2 -0.6 N.D. -0.0
no phage control no phage control -0.2 -0.2 -0.2 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 -0.7 N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.3 -0.3 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.2 -0.3 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 -0.5 N.D. -0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.9 -0.2 N.D. +0.2
no phage control no phage control -0.0 -0.4 -0.3 N.D. +0.1
phage phage_bap4 -0.1 +0.3 -0.6 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 -0.3 N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.3 -0.0 N.D. -0.3
phage phage_bap4 +0.1 +0.3 -0.6 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -0.3 -0.3 +0.0 N.D. +0.2
phage phage_bap4 +0.1 +0.3 -0.3 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -0.4 -0.3 +0.7 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.2 -0.3 N.D. +0.1
phage phage_bap4 -0.1 +0.2 -0.3 N.D. +0.2
phage phage_bap4 -0.0 +0.4 -0.3 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.4 +0.5 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.1 +0.3 N.D. -0.1
complex community Community=Locust bean gum; Passage=1 -0.0 -0.2 +0.4 N.D. +0.2
complex community Community=Kojac gum; Passage=4 +0.0 +0.3 -0.2 N.D. +0.5
complex community Community=Locust bean gum; Passage=4 -0.0 +0.0 +0.7 N.D. -0.1
complex community Community=guar; Passage=4 -0.1 -0.2 +0.8 N.D. +0.2
complex community Community=arabino-guar; Passage=4 +0.3 +0.2 +0.3 N.D. -0.1
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