Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF466 and GFF467 are separated by 32 nucleotidesGFF467 and GFF468 are separated by 143 nucleotidesGFF468 and GFF469 overlap by 31 nucleotidesGFF469 and GFF470 overlap by 4 nucleotides GFF466 - hypothetical protein, at 505,203 to 505,472 GFF466 GFF467 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 505,505 to 506,278 GFF467 GFF468 - Transcriptional regulator, LysR family, at 506,422 to 507,360 GFF468 GFF469 - hypothetical protein, at 507,330 to 507,869 GFF469 GFF470 - Transcriptional regulator, LysR family, at 507,866 to 508,840 GFF470
Group Condition GFF466 GFF467 GFF468 GFF469 GFF470
complex community Community=arabino-guar; Passage=4 -2.9 -0.6 +0.1 +0.4 -0.5
complex community Community=guar; Passage=4 -2.2 +0.3 +0.0 +0.1 -0.6
complex community Community=arabino-guar; Passage=4 -0.5 -0.5 -0.2 -0.7 -0.2
complex community Community=Locust bean gum; Passage=4 -1.0 +0.1 -0.0 +0.2 -1.1
vitamin M9 with Supernatant from Cyptococcus -1.1 -0.2 -0.2 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.0 -0.0 -0.0 -0.0 -0.5
complex community Community=arabino-guar; Passage=4 -1.0 -0.4 -0.2 -0.3 +0.3
complex community Community=Kojac gum; Passage=4 -0.4 -0.6 -0.0 -0.5 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 -0.0 +0.1 -0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 -0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 -0.0 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 +0.1 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.0 -0.1 +0.1 -0.6
complex community Community=Locust bean gum; Passage=4 -0.0 +0.3 -0.4 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.2 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.1 -0.0 -0.2 -0.3
complex community Community=Locust bean gum; Passage=4 +1.6 -0.3 +0.3 -0.2 -1.3
complex community Community=guar; Passage=4 -0.5 +0.2 -0.0 +0.4 +0.1
phage phage_bap4 +0.1 -0.1 +0.2 -0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 +0.1 +0.1 -0.2 +0.1
no phage control no phage control +0.5 +0.1 +0.0 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 +0.1 +0.1 -0.0 -0.1
phage phage_bap4 +0.4 -0.1 +0.2 +0.1 +0.1
complex community Community=guar; Passage=4 +0.4 +0.0 +0.2 -0.3 +0.5
phage phage_bap4 +0.5 -0.0 +0.1 -0.0 +0.3
phage phage_bap4 +0.5 -0.1 +0.0 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.7 +0.1 +0.1 +0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +1.2 +0.1 +0.1 -0.0 +0.3
complex community Community=arabino-guar; Passage=4 +1.3 +0.2 -0.2 +0.0 +0.5
complex community Community=guar; Passage=4 +1.4 +0.1 +0.2 +0.2 -0.1
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