Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4667 and GFF4668 are separated by 155 nucleotidesGFF4668 and GFF4669 are separated by 125 nucleotidesGFF4669 and GFF4670 are separated by 89 nucleotidesGFF4670 and GFF4671 overlap by 4 nucleotides GFF4667 - hypothetical protein, at 24,039 to 25,037 GFF4667 GFF4668 - hypothetical protein, at 25,193 to 26,209 GFF4668 GFF4669 - Pca operon transcriptional activator PcaQ, at 26,335 to 27,264 GFF4669 GFF4670 - Transcriptional regulator, AcrR family, at 27,354 to 27,959 GFF4670 GFF4671 - putative membrane protein, at 27,956 to 29,167 GFF4671
Group Condition GFF4667 GFF4668 GFF4669 GFF4670 GFF4671
complex community Community=arabino-guar; Passage=4 -1.1 -1.2 N.D. -2.3 -0.0
complex community Community=Locust bean gum; Passage=4 -0.3 -0.4 N.D. -1.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -1.2 N.D. -0.4 +0.1
complex community Community=guar; Passage=4 -0.0 -0.3 N.D. -1.2 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.5 N.D. -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -1.0 N.D. -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.6 N.D. -0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.7 -0.2 N.D. -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 -0.3 N.D. -0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.3 N.D. -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 +0.4 N.D. -0.9 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 N.D. -0.9 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.5 N.D. -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 +0.1 N.D. -0.5 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.2 N.D. -0.5 +0.2
complex community Community=arabino-guar; Passage=4 +0.3 -0.7 N.D. +0.1 -0.6
complex community Community=arabino-guar; Passage=4 -0.3 -0.4 N.D. -0.2 +0.2
no phage control no phage control -0.1 -0.7 N.D. +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.3 N.D. -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 +0.6 N.D. -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.3 N.D. -0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.3 N.D. -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.5 N.D. -0.7 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.6 N.D. -0.6 +0.1
complex community Community=Kojac gum; Passage=4 -0.4 +0.4 N.D. -0.4 +0.5
phage phage_bap4 +0.3 -0.2 N.D. +0.4 -0.2
complex community Community=guar; Passage=4 +0.0 -0.4 N.D. +0.6 +0.2
phage phage_bap4 -0.2 +0.6 N.D. +0.3 -0.2
complex community Community=guar; Passage=4 -0.1 +0.9 N.D. -0.7 +0.5
complex community Community=Locust bean gum; Passage=4 -0.5 +1.6 N.D. +0.0 +0.0
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