Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_23810 and PS417_23815 are separated by 431 nucleotidesPS417_23815 and PS417_23820 overlap by 1 nucleotidesPS417_23820 and PS417_23825 are separated by 16 nucleotidesPS417_23825 and PS417_23830 are separated by 118 nucleotides PS417_23810: PS417_23810 - acetolactate synthase 3 catalytic subunit, at 5,151,863 to 5,153,587 _23810 PS417_23815: PS417_23815 - pseudouridine synthase, at 5,154,019 to 5,154,348 _23815 PS417_23820: PS417_23820 - hypothetical protein, at 5,154,348 to 5,155,082 _23820 PS417_23825: PS417_23825 - penicillin-binding protein, at 5,155,099 to 5,157,423 _23825 PS417_23830: PS417_23830 - hypothetical protein, at 5,157,542 to 5,159,098 _23830
Group Condition PS417_23810 PS417_23815 PS417_23820 PS417_23825 PS417_23830
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.0 -0.5 -1.1 -2.3 -0.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.6 -0.1 -1.6 -1.5 -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.4 -0.4 -2.2 -1.6 -0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.6 -0.2 -0.2 -1.1 -0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.5 +0.2 -0.6 -0.9 -1.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.5 +0.1 -1.2 -0.6 -1.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.1 -0.4 -1.3 -0.0 -0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.4 +0.4 -1.4 -0.6 -1.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.2 +0.7 -0.7 -0.8 -1.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.9 +0.3 -0.9 -0.7 -0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.9 -0.3 -0.1 -0.3 -1.2
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.3 -0.4 -0.8 -1.0 -1.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.7 -0.1 -1.7 -0.3 -0.7
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.1 -0.2 -1.3 -0.9 -1.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.1 +0.4 -0.3 -1.1 -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.7 -0.0 -0.9 -0.9 -0.6
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.2 +0.1 -0.7 -0.8 -1.2
carbon source NAG (C) -5.6 -0.2 -0.1 -0.1 -0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.9 +0.1 -0.6 -0.1 -1.2
soil soil sample 4; outgrowth in LB -4.1 -0.1 -0.3 -0.8 -1.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.7 +0.3 -0.4 +0.1 -0.7
soil soil sample 7; outgrowth in LB -4.3 +0.1 -0.6 -1.1 -0.6
carbon source NAG (C) -5.2 +0.1 -0.1 -0.2 -0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.4 +0.1 -0.2 -0.1 -0.6
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.6 +0.3 -0.8 -0.3 -1.6
carbon source Putrescine (C) -5.6 -0.3 -0.1 -0.2 +0.3
carbon source Cytidine (C) -5.6 +0.0 +0.2 -0.2 -0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.8 +0.6 -0.1 +0.1 -0.3
carbon source Carbon source L-Ornithine 10 mM -4.8 +0.4 -0.5 -0.5 +0.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.2 -0.3 -1.5 -0.6 +5.1
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PS417_23810
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PS417_23815
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PS417_23825
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PS417_23830
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