Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_23780 and PS417_23785 are separated by 353 nucleotidesPS417_23785 and PS417_23790 overlap by 1 nucleotidesPS417_23790 and PS417_23795 are separated by 63 nucleotidesPS417_23795 and PS417_23800 are separated by 144 nucleotides PS417_23780: PS417_23780 - exodeoxyribonuclease V subunit gamma, at 5,143,800 to 5,147,252 _23780 PS417_23785: PS417_23785 - sulfite oxidase, at 5,147,606 to 5,148,226 _23785 PS417_23790: PS417_23790 - sulfoxide reductase catalytic subunit YedY, at 5,148,226 to 5,149,239 _23790 PS417_23795: PS417_23795 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 5,149,303 to 5,150,160 _23795 PS417_23800: PS417_23800 - ketol-acid reductoisomerase, at 5,150,305 to 5,151,321 _23800
Group Condition PS417_23780 PS417_23785 PS417_23790 PS417_23795 PS417_23800
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.1 -0.2 N.D. -7.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.3 -0.0 N.D. -7.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.0 -0.0 N.D. -7.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.1 -0.2 N.D. -7.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.1 -0.2 N.D. -6.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.1 +0.0 N.D. -7.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.0 +0.2 N.D. -7.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.2 +0.0 N.D. -6.8
nitrogen source Uridine (N) N.D. -0.0 +0.0 N.D. -6.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.0 -0.1 N.D. -6.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.1 -0.2 N.D. -6.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.2 -0.2 N.D. -6.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.2 +0.3 N.D. -6.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.0 +0.1 N.D. -6.7
carbon source L-Asparagine (C) N.D. -0.0 -0.1 N.D. -6.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.1 -0.2 N.D. -6.0
nitrogen source Cytidine (N) N.D. +0.0 -0.3 N.D. -6.1
nitrogen source nitrate (N) N.D. +0.0 -0.0 N.D. -6.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.0 +0.3 N.D. -6.7
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.0 -0.3 N.D. -5.9
carbon source NAG (C) N.D. +0.1 -0.1 N.D. -6.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.1 +0.1 N.D. -6.4
carbon source Cytidine (C) N.D. -0.0 -0.0 N.D. -6.1
nitrogen source Inosine (N) N.D. +0.0 +0.2 N.D. -6.3
carbon source L-Valine (C) N.D. +0.1 -0.1 N.D. -6.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -0.3 +0.2 N.D. -5.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.1 +0.5 N.D. -6.5
carbon source L-Tryptophan (C) N.D. +0.1 -0.0 N.D. -6.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. +0.2 -0.3 N.D. -5.7
carbon source Uridine (C) N.D. +0.1 +0.1 N.D. -6.0
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