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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4646 and GFF4647 are separated by 53 nucleotides
GFF4647 and GFF4648 overlap by 4 nucleotides
GFF4648 and GFF4649 are separated by 132 nucleotides
GFF4649 and GFF4650 are separated by 49 nucleotides
GFF4646 - Magnesium and cobalt transport protein CorA, at 2,509 to 3,486
GFF4646
GFF4647 - no description, at 3,540 to 4,019
GFF4647
GFF4648 - Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system, at 4,016 to 5,548
GFF4648
GFF4649 - Iron-chelator utilization protein, at 5,681 to 6,520
GFF4649
GFF4650 - Transcriptional regulator, PadR family, at 6,570 to 7,145
GFF4650
Group
Condition
GFF4646
GFF4647
GFF4648
GFF4649
GFF4650
complex community
Community=arabino-guar; Passage=4
+0.1
-0.1
-0.3
-0.6
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.9
-0.0
-0.1
-0.2
phage
phage_bap4
-0.1
-0.6
-0.1
-0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
-0.4
-0.0
-0.7
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.5
+0.1
-0.2
-0.4
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.2
-0.8
-0.0
-0.3
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
-0.2
-0.1
-0.2
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.5
-0.2
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.3
+0.0
-0.5
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
-0.7
+0.1
-0.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.1
-0.1
-0.2
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.2
+0.1
-0.5
-0.4
vitamin
M9 with Supernatant from Cyptococcus
+0.0
-0.1
-0.2
-0.5
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.1
+0.1
-0.3
-0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.3
-0.1
-0.5
+0.2
complex community
Community=Kojac gum; Passage=4
+0.2
+0.2
+0.0
-0.0
-1.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
-0.6
+0.2
-0.3
-0.2
phage
phage_bap4
-0.0
-0.2
-0.1
-0.5
+0.3
no phage control
no phage control
-0.1
-0.5
-0.1
-0.2
+0.3
phage
phage_bap4
-0.0
-0.5
+0.1
-0.2
+0.2
complex community
Community=guar; Passage=4
-0.1
+0.4
-0.0
-1.0
+0.6
complex community
Community=Kojac gum; Passage=1
-0.0
+0.4
+0.2
-0.4
-0.2
complex community
Community=guar; Passage=4
+0.1
+1.6
-0.6
-0.6
-0.3
complex community
Community=arabino-guar; Passage=4
-0.1
+0.7
+0.3
+0.4
-0.8
complex community
Community=guar; Passage=4
-0.0
+1.1
+0.2
+0.4
-1.1
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.1
+0.6
-0.2
+0.3
complex community
Community=guar; Passage=4
+0.0
+1.7
+0.1
+0.2
-1.2
complex community
Community=arabino-guar; Passage=4
-0.1
-0.3
+0.6
+1.1
-0.2
complex community
Community=arabino-guar; Passage=4
+0.1
-0.2
+0.5
+0.7
+0.1
complex community
Community=Locust bean gum; Passage=4
+0.4
+1.4
-0.7
-0.0
+0.0
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