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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4639 and GFF4640 are separated by 804 nucleotides
GFF4640 and GFF4641 are separated by 31 nucleotides
GFF4641 and GFF4642 overlap by 4 nucleotides
GFF4642 and GFF4643 are separated by 13 nucleotides
GFF4639 - Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33), at 280,011 to 280,784
GFF4639
GFF4640 - hypothetical protein, at 281,589 to 283,280
GFF4640
GFF4641 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 283,312 to 285,027
GFF4641
GFF4642 - no description, at 285,024 to 285,434
GFF4642
GFF4643 - no description, at 285,448 to 285,663
GFF4643
Group
Condition
GFF4639
GFF4640
GFF4641
GFF4642
GFF4643
complex community
Community=Kojac gum; Passage=4
-2.2
-2.8
+0.2
-0.1
-0.3
complex community
Community=Locust bean gum; Passage=4
-2.5
-1.1
+0.1
-0.1
-0.1
complex community
Community=Locust bean gum; Passage=4
-2.4
-1.1
-0.1
-0.1
+0.1
complex community
Community=Locust bean gum; Passage=4
-2.0
-1.0
+0.0
+0.2
-0.6
complex community
Community=Locust bean gum; Passage=4
-2.1
-1.0
+0.1
-0.0
-0.3
complex community
Community=guar; Passage=4
-2.0
-0.5
+0.1
+0.0
-0.2
complex community
Community=guar; Passage=4
-1.7
-0.6
-0.1
-0.0
-0.1
complex community
Community=guar; Passage=4
-1.7
-0.5
+0.1
-0.2
+0.1
complex community
Community=arabino-guar; Passage=4
-1.1
-0.4
-0.3
-0.1
-0.0
complex community
Community=arabino-guar; Passage=4
-1.0
-0.7
-0.2
+0.3
-0.3
complex community
Community=guar; Passage=4
-1.3
-0.5
-0.0
-0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-1.4
-0.1
-0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.9
-0.1
-0.3
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-1.4
-0.0
-0.1
-0.0
complex community
Community=arabino-guar; Passage=4
-0.6
-0.5
-0.2
+0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-1.1
+0.0
-0.1
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.9
-0.0
-0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.7
-0.0
-0.2
-0.1
complex community
Community=arabino-guar; Passage=4
-0.6
-0.6
-0.1
+0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.7
+0.0
-0.1
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.2
-0.9
+0.0
-0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.0
-1.0
-0.1
-0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.7
-0.1
+0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.7
-0.1
-0.1
+0.2
phage
phage_bap4
-0.2
-0.3
-0.0
-0.2
-0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.5
-0.0
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.8
+0.0
-0.1
+0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.7
+0.0
-0.0
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.6
+0.0
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.7
+0.1
+0.0
+0.1
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