Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF462 and GFF463 are separated by 100 nucleotidesGFF463 and GFF464 are separated by 28 nucleotidesGFF464 and GFF465 are separated by 112 nucleotidesGFF465 and GFF466 are separated by 63 nucleotides GFF462 - BUG/TctC family periplasmic protein, at 500,952 to 501,938 GFF462 GFF463 - Malonyl-CoA decarboxylase (EC 4.1.1.9), at 502,039 to 503,505 GFF463 GFF464 - Transcriptional regulator, GntR family, at 503,534 to 504,202 GFF464 GFF465 - Prolipoprotein diacylglyceryl transferase, at 504,315 to 505,139 GFF465 GFF466 - hypothetical protein, at 505,203 to 505,472 GFF466
Group Condition GFF462 GFF463 GFF464 GFF465 GFF466
complex community Community=arabino-guar; Passage=4 +0.5 -0.0 +0.1 N.D. -2.9
complex community Community=guar; Passage=4 +0.3 -0.4 +0.1 N.D. -2.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.5 -0.1 N.D. -1.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.6 -0.2 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.1 -0.2 N.D. -1.0
complex community Community=arabino-guar; Passage=4 +0.0 -0.5 +0.3 N.D. -1.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.3 -0.1 N.D. -0.3
complex community Community=guar; Passage=4 -0.3 +0.1 -0.2 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.5 -0.2 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.8 -0.0 N.D. +0.3
complex community Community=guar; Passage=4 +0.1 -1.4 +0.1 N.D. +0.4
complex community Community=Kojac gum; Passage=4 +0.1 -0.5 +0.0 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.3 -0.3 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.4 -0.1 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.4 -0.1 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.4 -0.1 N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.5 +0.1 N.D. +0.3
complex community Community=Locust bean gum; Passage=4 +0.0 +0.7 +0.3 N.D. -1.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 -0.3 N.D. +0.6
no phage control no phage control -0.2 -0.3 +0.2 N.D. +0.4
no phage control no phage control -0.1 -0.2 -0.1 N.D. +0.5
complex community Community=arabino-guar; Passage=4 +0.6 +0.3 -0.2 N.D. -0.5
phage phage_bap4 -0.3 -0.0 +0.2 N.D. +0.4
no phage control no phage control +0.0 -0.2 +0.2 N.D. +0.5
complex community Community=guar; Passage=4 -0.2 -0.8 +0.4 N.D. +1.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.3 -0.1 N.D. +0.6
complex community Community=Locust bean gum; Passage=4 -0.2 -0.6 +0.1 N.D. +1.6
phage phage_bap4 -0.0 +0.4 +0.2 N.D. +0.5
complex community Community=arabino-guar; Passage=4 +0.4 -0.2 -0.1 N.D. +1.3
complex community Community=Locust bean gum; Passage=4 +0.3 +0.0 +0.0 N.D. +1.2
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