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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4637 and GFF4638 overlap by 8 nucleotides
GFF4638 and GFF4639 overlap by 4 nucleotides
GFF4639 and GFF4640 are separated by 804 nucleotides
GFF4640 and GFF4641 are separated by 31 nucleotides
GFF4637 - CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-), at 277,608 to 278,939
GFF4637
GFF4638 - CDP-glucose 4,6-dehydratase (EC 4.2.1.45), at 278,932 to 280,014
GFF4638
GFF4639 - Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33), at 280,011 to 280,784
GFF4639
GFF4640 - hypothetical protein, at 281,589 to 283,280
GFF4640
GFF4641 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 283,312 to 285,027
GFF4641
Group
Condition
GFF4637
GFF4638
GFF4639
GFF4640
GFF4641
complex community
Community=Locust bean gum; Passage=4
-1.8
-2.3
-2.5
-1.1
+0.1
complex community
Community=Kojac gum; Passage=4
-1.0
-1.5
-2.2
-2.8
+0.2
complex community
Community=Locust bean gum; Passage=4
-1.5
-2.3
-2.4
-1.1
-0.1
complex community
Community=Locust bean gum; Passage=4
-1.2
-2.3
-2.1
-1.0
+0.1
complex community
Community=Locust bean gum; Passage=4
-1.4
-1.8
-2.0
-1.0
+0.0
complex community
Community=guar; Passage=4
-1.1
-1.6
-1.7
-0.6
-0.1
complex community
Community=guar; Passage=4
-1.0
-1.6
-2.0
-0.5
+0.1
complex community
Community=guar; Passage=4
-1.1
-1.6
-1.7
-0.5
+0.1
complex community
Community=guar; Passage=4
-0.8
-1.1
-1.3
-0.5
-0.0
complex community
Community=arabino-guar; Passage=4
-0.6
-0.5
-1.1
-0.4
-0.3
complex community
Community=arabino-guar; Passage=4
-0.7
-0.7
-0.6
-0.5
-0.2
complex community
Community=arabino-guar; Passage=4
-0.1
-0.3
-1.0
-0.7
-0.2
complex community
Community=arabino-guar; Passage=4
-0.2
-0.7
-0.6
-0.6
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.2
+0.0
-0.1
-1.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.2
-0.1
-1.1
+0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.0
-0.1
-1.4
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.1
-0.3
-0.9
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.1
-0.3
-0.9
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.2
-0.3
-0.7
+0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.1
-0.0
-1.0
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.0
-0.2
-0.9
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.0
-0.3
-0.7
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.1
-0.2
-0.6
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.1
-0.2
-0.7
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.0
-0.1
-0.7
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.1
-0.1
-0.7
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.0
-0.1
-0.8
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.0
-0.1
-0.7
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.0
-0.2
-0.5
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
+0.1
-0.2
-0.5
-0.0
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