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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4636 and GFF4637 overlap by 1 nucleotides
GFF4637 and GFF4638 are separated by 13 nucleotides
GFF4638 and GFF4639 are separated by 523 nucleotides
GFF4639 and GFF4640 are separated by 14 nucleotides
GFF4636 - Succinate dehydrogenase hydrophobic membrane anchor protein, at 428,919 to 429,266
GFF4636
GFF4637 - Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1), at 429,266 to 431,032
GFF4637
GFF4638 - Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1), at 431,046 to 431,765
GFF4638
GFF4639 - 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2), at 432,289 to 435,090
GFF4639
GFF4640 - Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61), at 435,105 to 436,313
GFF4640
Group
Condition
GFF4636
GFF4637
GFF4638
GFF4639
GFF4640
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
-6.1
-4.8
-3.9
-4.6
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
-2.5
-3.1
-2.3
-4.8
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-3.5
-2.6
-2.7
-2.3
N.D.
phage
6H2_phage 10 MOI; agar plate assay
-2.6
-2.0
-1.5
-4.6
N.D.
phage
Ffm_phage 10 MOI; agar plate assay
-2.4
-2.0
-1.8
-4.4
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-1
-1.5
-1.7
-1.7
-4.1
N.D.
micoeukaryotes
C.elegans, mixed culture-1
-2.0
-1.5
-1.5
-3.6
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
-1.8
-1.4
-1.2
-3.8
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-1
-1.8
-1.5
-1.3
-3.5
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
-2.1
-1.8
-1.4
-2.7
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-1.7
-1.5
-1.0
-3.5
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
-1.9
-1.7
-1.5
-2.3
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
-1.3
-1.4
-1.6
-3.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
-2.1
-1.7
-1.4
-1.6
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-2
-1.4
-1.4
-1.7
-2.3
N.D.
micoeukaryotes
C.elegans, mixed culture-2
-1.7
-1.8
-1.2
-1.9
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-1.9
-1.8
-2.1
-0.7
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI
-1.4
-1.2
-1.2
-2.6
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI
-1.1
-1.4
-0.8
-2.8
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-1.7
-1.5
-0.7
-2.0
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
-1.3
-1.4
-1.0
-2.0
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.1875 MOI
-1.1
-1.1
-1.2
-2.3
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
-1.1
-0.9
-1.1
-2.3
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
-1.3
-1.2
-1.0
-1.7
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-1.4
-0.9
-0.2
-2.7
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
-0.7
-0.8
-1.1
-2.3
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-2.0
-0.9
-1.6
-0.2
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-1.0
-1.1
-1.1
-1.2
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI
-1.2
-0.9
-0.9
-1.3
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.3
+1.0
+1.0
+2.0
N.D.
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