Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_23680	PS417_23685	PS417_23690	PS417_23695	PS417_23700
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.8	-2.8	-2.8	-2.9	-2.6
carbon source	L-Tryptophan (C)	-3.1	-3.4	-3.1	-3.2	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7	-0.8	-0.8	-1.0	-1.1
phage	JP1 MOI 10	-0.6	+0.0	-0.2	-0.4	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1	+0.2	-0.2	-0.1	-0.2
carbon source	L-Histidine (C)	-0.2	-0.1	-1.3	-0.6	+0.7
phage	JP1 MOI 1	-0.8	+0.1	-0.2	-0.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.0	-0.4	+0.1	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8	+0.2	-0.3	-0.1	-0.1
agar plate interaction control	Taped volatile agar plate with no fungus	-0.9	+0.3	-0.2	-0.0	+0.1
carbon source	L-Valine (C)	-0.4	-0.2	-2.2	-0.1	+2.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9	+0.2	-0.2	-0.2	+0.7
carbon source	L-Histidine (C)	+0.2	-0.1	-1.1	-0.2	+0.8
phage	P. simiae ORA MOI 1	+0.5	+0.2	-0.2	-0.2	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.2	+0.2	+0.3	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6	+0.0	+0.4	+0.1	+0.3
carbon source	L-Valine (C)	+0.3	-0.5	-1.6	+0.0	+2.0
phage	JP1 MOI 10	+0.6	-0.3	-0.1	+0.3	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.1	-0.5	+0.1	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+0.3	+0.2	-0.0	-0.3
seeds	Growth on radish seeds for 72 hours	+0.4	+0.3	-0.0	-0.3	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-tyrosine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	+0.3	+0.7	+0.4	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7	+0.1	-0.0	-0.4	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8	+0.3	+0.1	-0.2	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8	-0.2	+0.2	+0.1	+0.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8	-0.1	+0.3	+0.1	-0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4	+0.3	-0.1	+0.2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5	+0.4	-0.2	+0.2	+0.5
carbon source	L-Leucine (C)	+0.1	+0.4	+0.6	+0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8	+0.3	-0.0	+0.4	+0.5