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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4623 and GFF4624 are separated by 81 nucleotides
GFF4624 and GFF4625 overlap by 4 nucleotides
GFF4625 and GFF4626 are separated by 10 nucleotides
GFF4626 and GFF4627 are separated by 197 nucleotides
GFF4623 - hypothetical protein, at 4,618,338 to 4,618,457
GFF4623
GFF4624 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 4,618,539 to 4,619,909
GFF4624
GFF4625 - RND efflux system, inner membrane transporter, at 4,619,906 to 4,623,067
GFF4625
GFF4626 - RND efflux system, membrane fusion protein, at 4,623,078 to 4,624,211
GFF4626
GFF4627 - hypothetical protein, at 4,624,409 to 4,625,137
GFF4627
Group
Condition
GFF4623
GFF4624
GFF4625
GFF4626
GFF4627
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.2
-0.4
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.3
-0.2
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.4
-0.5
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.6
-0.4
-0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.3
-0.2
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.3
-0.4
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.2
-0.3
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.2
-0.4
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.1
-0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.3
-0.3
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.2
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.3
-0.3
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.2
-0.1
-0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.2
-0.4
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.2
-0.2
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
-0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
-0.2
-0.2
-0.3
-0.4
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