Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4621 and GFF4622 are separated by 17 nucleotidesGFF4622 and GFF4623 are separated by 251 nucleotidesGFF4623 and GFF4624 are separated by 77 nucleotidesGFF4624 and GFF4625 are separated by 107 nucleotides GFF4621 - Hydroxycarboxylate dehydrogenase (NADP+) HcxB, at 263,021 to 264,076 GFF4621 GFF4622 - Permease of the drug/metabolite transporter (DMT) superfamily, at 264,094 to 264,915 GFF4622 GFF4623 - Transcriptional regulator, AcrR family, at 265,167 to 265,817 GFF4623 GFF4624 - N-acetylglutamate kinase (EC 2.7.2.8), at 265,895 to 266,788 GFF4624 GFF4625 - Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33), at 266,896 to 267,993 GFF4625
Group Condition GFF4621 GFF4622 GFF4623 GFF4624 GFF4625
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.0 -0.3 N.D. -5.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.3 -0.5 N.D. -4.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 -0.6 N.D. -5.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.3 -0.7 N.D. -3.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.3 -0.9 N.D. -4.5
complex community Community=Kojac gum; Passage=4 -0.8 +0.4 -0.6 N.D. -3.7
complex community Community=guar; Passage=4 +0.2 +0.1 -1.3 N.D. -3.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 -0.9 N.D. -3.5
complex community Community=Locust bean gum; Passage=4 +0.1 +0.0 -0.5 N.D. -3.8
complex community Community=Locust bean gum; Passage=4 -0.4 +0.1 -0.2 N.D. -3.7
phage phage_bap4 +0.3 +0.1 +0.4 N.D. -4.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.2 -0.3 N.D. -3.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.0 N.D. -4.2
phage phage_bap4 +0.0 +0.4 +0.6 N.D. -4.9
complex community Community=arabino-guar; Passage=4 +0.1 +0.5 -0.6 N.D. -3.8
complex community Community=arabino-guar; Passage=4 +0.1 -0.1 -0.4 N.D. -3.5
phage phage_bap4 +0.2 -0.2 +0.6 N.D. -4.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.0 -0.3 N.D. -3.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 +0.1 N.D. -4.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 -0.5 N.D. -3.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 -0.4 N.D. -3.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 -0.2 N.D. -3.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 -0.1 N.D. -3.4
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 +0.3 N.D. -3.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 -0.6 N.D. -3.1
phage phage_bap4 -0.0 -0.1 +0.3 N.D. -3.5
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 +0.3 N.D. -3.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.5 +0.1 +0.1 N.D. -3.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.0 +0.1 N.D. -3.2
complex community Community=arabino-guar; Passage=4 +0.3 +0.2 +0.4 N.D. -3.2
remove
GFF4621
plot		 remove
GFF4622
plot		 remove
GFF4623		 remove
GFF4624
plot		 remove
GFF4625
plot