Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4620 and GFF4621 are separated by 3 nucleotidesGFF4621 and GFF4622 are separated by 17 nucleotidesGFF4622 and GFF4623 are separated by 251 nucleotidesGFF4623 and GFF4624 are separated by 77 nucleotides GFF4620 - Gluconolactonase (EC 3.1.1.17), at 262,085 to 263,017 GFF4620 GFF4621 - Hydroxycarboxylate dehydrogenase (NADP+) HcxB, at 263,021 to 264,076 GFF4621 GFF4622 - Permease of the drug/metabolite transporter (DMT) superfamily, at 264,094 to 264,915 GFF4622 GFF4623 - Transcriptional regulator, AcrR family, at 265,167 to 265,817 GFF4623 GFF4624 - N-acetylglutamate kinase (EC 2.7.2.8), at 265,895 to 266,788 GFF4624
Group Condition GFF4620 GFF4621 GFF4622 GFF4623 GFF4624
complex community Community=Kojac gum; Passage=4 -0.6 -0.8 +0.4 -0.6 N.D.
complex community Community=guar; Passage=4 +0.2 -0.1 -0.3 -1.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.3 -0.7 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 -0.3 -0.5 N.D.
complex community Community=guar; Passage=4 +0.5 -0.2 -0.1 -1.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.1 +0.0 -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.6 -0.4 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.0 -0.3 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.1 -0.3 -0.3 N.D.
complex community Community=guar; Passage=4 +0.6 +0.2 +0.1 -1.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.2 +0.3 -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.4 +0.1 -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.1 +0.2 -0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.4 +0.1 -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 +0.1 -0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.3 -0.2 -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 +0.7 -0.4 +0.1 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 +0.5 -0.6 N.D.
phage phage_bap4 -0.3 +0.1 -0.2 +0.6 N.D.
complex community Community=arabino-guar; Passage=4 -0.6 +0.3 +0.2 +0.4 N.D.
complex community Community=arabino-guar; Passage=4 +0.6 +0.1 -0.1 -0.4 N.D.
phage phage_bap4 +0.1 -0.2 -0.2 +0.7 N.D.
phage phage_bap4 +0.0 +0.2 -0.2 +0.6 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.1 -0.2 +0.3 N.D.
phage phage_bap4 -0.1 +0.0 +0.4 +0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.4 +0.0 +0.3 N.D.
complex community Community=guar; Passage=4 +0.4 -0.2 +0.3 +0.7 N.D.
no phage control no phage control -0.0 +0.4 +0.4 +0.4 N.D.
phage phage_bap4 +0.3 +0.1 +0.3 +0.6 N.D.
phage phage_bap4 +0.2 +0.2 +0.3 +1.1 N.D.
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