Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_23615	PS417_23620	PS417_23625	PS417_23630	PS417_23635
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6	-0.5	-0.7	-0.1	-0.3
soil	soil sample 7; outgrowth in LB	-2.0	-0.2	-1.4	+0.4	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3	-0.2	-1.4	-0.5	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	+0.0	-1.7	+0.5	+0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4	-0.7	-1.1	+0.0	-0.6
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.6	-0.3	-2.5	+0.4	+1.0
solid stress	Fraxetin 3 mM; solid stress	-2.4	-0.0	+0.6	+0.3	+0.2
soil	soil sample 5; outgrowth in LB	-0.5	-0.7	-0.6	-0.3	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	-0.6	-0.6	+0.2	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.4	-1.3	+0.3	+0.3
phage	Wcs_0.1	-0.9	+0.6	-0.5	-0.3	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-0.5	-0.1	+0.3	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-0.3	+0.6	-0.3	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0	+0.0	-0.5	-0.2	+1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.6	-0.0	+1.0	+0.1	-0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.2	+0.3	+0.5	+0.0	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	+0.1	-0.7	+0.6	-0.3
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.8	-0.4	-1.0	+0.3	+0.4
phage	JP1 MOI 1	+1.2	-0.1	-2.0	+0.6	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	-0.4	-0.5	+0.4	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	-0.2	-0.6	+0.5	+0.3
agar plate interaction control	Taped volatile agar plate with no fungus	+1.1	+0.2	-0.1	+0.4	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.1	+1.5	-0.1	+0.3
root	root sample 6; outgrowth in LB	-0.0	-0.0	-0.7	+0.5	+1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	+0.4	+1.4	+0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.1	-0.2	-0.2	+0.8	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1	-0.1	+0.6	-0.2	+0.3
ecofab	LB in EcoFAB_3.5mL	+0.0	+0.6	+1.5	-0.0	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+0.2	+0.8	+0.2	+0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.4	+0.0	-0.2	+0.2	+1.9