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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 16 experiments (either direction), sorted by average fitness
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500 nt
GFF4599 and GFF4600 are separated by 44 nucleotides
GFF4600 and GFF4601 are separated by 16 nucleotides
GFF4601 and GFF4602 are separated by 158 nucleotides
GFF4602 and GFF4603 overlap by 15 nucleotides
GFF4599 - L-carnitine dehydratase/bile acid-inducible protein F, at 4,590,900 to 4,592,141
GFF4599
GFF4600 - hypothetical protein, at 4,592,186 to 4,593,334
GFF4600
GFF4601 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 4,593,351 to 4,594,931
GFF4601
GFF4602 - Transcriptional regulator, IclR family, at 4,595,090 to 4,595,923
GFF4602
GFF4603 - hypothetical protein, at 4,595,909 to 4,597,507
GFF4603
Group
Condition
GFF4599
GFF4600
GFF4601
GFF4602
GFF4603
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.5
-0.3
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.2
-0.2
-0.2
-0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.1
-0.5
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
-0.3
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.2
-0.2
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.5
-0.1
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.4
-0.2
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.2
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.3
-0.1
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.1
-0.1
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.2
-0.3
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
-0.1
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.4
-0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.3
-0.1
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.0
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.0
-0.0
+0.2
-0.4
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