Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4593 and GFF4594 are separated by 153 nucleotidesGFF4594 and GFF4595 are separated by 175 nucleotidesGFF4595 and GFF4596 are separated by 61 nucleotidesGFF4596 and GFF4597 are separated by 110 nucleotides GFF4593 - Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4), at 233,476 to 234,372 GFF4593 GFF4594 - Aspartate ammonia-lyase (EC 4.3.1.1), at 234,526 to 235,998 GFF4594 GFF4595 - Transcriptional regulator, at 236,174 to 237,160 GFF4595 GFF4596 - Amidase family protein BDAG_03520, at 237,222 to 238,664 GFF4596 GFF4597 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 238,775 to 239,713 GFF4597
Group Condition GFF4593 GFF4594 GFF4595 GFF4596 GFF4597
complex community Community=Locust bean gum; Passage=4 -1.1 -0.3 -0.7 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 -0.2 -0.4 +0.1 -0.8
complex community Community=guar; Passage=4 -0.6 -0.1 -0.1 -0.1 -0.9
complex community Community=Locust bean gum; Passage=4 -0.8 -0.2 -0.3 -0.1 -0.2
complex community Community=Kojac gum; Passage=4 -0.7 -0.3 -0.7 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.9 -0.1 -0.6 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.9 -0.3 -0.3 -0.1 +0.5
complex community Community=guar; Passage=4 -0.8 +0.3 -0.1 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.2 -0.3 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.0 -0.3 +0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 -0.6 +0.1 -0.0
complex community Community=guar; Passage=4 -0.4 +0.3 -1.1 -0.3 +0.7
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.3 -0.0 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.8 +0.2 -0.7 -0.0 +0.7
complex community Community=guar; Passage=4 -0.4 +0.0 -0.6 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.0 -0.2 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 +0.2 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.2 -0.2 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.3 +0.2 -0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.0 -0.5 -0.1 +0.3
complex community Community=arabino-guar; Passage=4 -0.8 -0.1 +0.1 -0.1 +0.4
complex community Community=Locust bean gum; Passage=1 -0.0 -0.0 -0.2 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 +0.2 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 +0.1 -0.1 +0.2
no phage control no phage control +0.2 +0.2 +0.0 -0.2 -0.0
complex community Community=arabino-guar; Passage=4 -0.7 +0.3 +0.2 -0.1 +0.6
no phage control no phage control +0.2 -0.1 +0.1 -0.1 +0.3
no phage control no phage control +0.3 +0.2 +0.2 -0.1 -0.1
phage phage_bap4 +0.2 +0.1 +0.2 -0.1 +0.1
phage phage_bap4 +0.2 +0.0 +0.3 -0.1 +0.3
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