Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF457 and GFF458 are separated by 25 nucleotidesGFF458 and GFF459 are separated by 61 nucleotidesGFF459 and GFF460 overlap by 4 nucleotidesGFF460 and GFF461 are separated by 15 nucleotides GFF457 - Nitrilase (EC 3.5.5.7), at 495,012 to 496,016 GFF457 GFF458 - Aldoxime dehydratase, at 496,042 to 497,097 GFF458 GFF459 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily / DUF3471 domain, at 497,159 to 498,604 GFF459 GFF460 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 498,601 to 500,139 GFF460 GFF461 - Enoyl-CoA hydratase (EC 4.2.1.17), at 500,155 to 500,955 GFF461
Group Condition GFF457 GFF458 GFF459 GFF460 GFF461
complex community Community=Locust bean gum; Passage=4 +0.2 -0.5 +0.3 -0.3 -2.4
complex community Community=arabino-guar; Passage=4 -0.0 -0.1 +0.1 -0.8 -0.7
complex community Community=guar; Passage=4 +0.2 -0.2 +0.1 -0.5 -0.9
complex community Community=guar; Passage=4 +0.0 +0.2 -0.6 -0.9 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 -0.0 -0.3 -0.5 -0.4
complex community Community=guar; Passage=4 +0.1 -0.3 -0.1 -0.8 +0.2
phage phage_bap4 -0.2 -0.3 -0.1 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 +0.0 -0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 -0.2 +0.1 -0.2
phage phage_bap4 -0.2 +0.1 +0.2 -0.0 -0.5
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.2 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.0 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 +0.1 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.2 -0.2 +0.2 -0.4
phage phage_bap4 -0.1 +0.0 -0.3 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.0 +0.4 +0.1 -0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.3 +0.0 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.2 +0.0 -0.3
complex community Community=arabino-guar; Passage=4 +0.1 -0.2 +0.0 -0.3 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 -0.2 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 -0.1 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.0 +0.6 +0.2 -0.3 -0.3
complex community Community=guar; Passage=4 -0.0 +0.3 +0.6 -0.3 -0.3
phage phage_bap4 -0.2 -0.3 +0.2 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 -0.1 -0.0 +0.3
phage phage_bap4 -0.0 +0.1 -0.2 +0.2 +0.3
phage phage_bap4 -0.1 +0.0 +0.1 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 +0.1 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 +0.3 -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.4 +0.2 +0.2 +0.2
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