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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4580 and GFF4581 overlap by 23 nucleotides
GFF4581 and GFF4582 are separated by 352 nucleotides
GFF4582 and GFF4583 overlap by 4 nucleotides
GFF4583 and GFF4584 are separated by 94 nucleotides
GFF4580 - hypothetical protein, at 220,848 to 222,875
GFF4580
GFF4581 - hypothetical protein, at 222,853 to 223,146
GFF4581
GFF4582 - TRAP-type C4-dicarboxylate transport system, small permease component, at 223,499 to 224,098
GFF4582
GFF4583 - TRAP-type C4-dicarboxylate transport system, large permease component, at 224,095 to 225,393
GFF4583
GFF4584 - TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein, at 225,488 to 226,525
GFF4584
Group
Condition
GFF4580
GFF4581
GFF4582
GFF4583
GFF4584
complex community
Community=Locust bean gum; Passage=4
-0.1
-2.3
+0.4
-1.8
-0.7
complex community
Community=guar; Passage=4
+0.1
-1.4
+0.7
-0.5
-2.1
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.6
+0.5
-0.5
-1.4
complex community
Community=arabino-guar; Passage=4
-0.4
-0.5
-0.2
-1.1
+0.3
complex community
Community=guar; Passage=4
+0.0
-1.0
+0.6
-1.5
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.8
-0.5
-0.0
-0.7
+0.3
complex community
Community=guar; Passage=4
-0.2
-0.3
-0.2
-0.4
-0.2
complex community
Community=arabino-guar; Passage=4
+0.1
-0.4
+0.1
+0.1
-0.7
complex community
Community=Locust bean gum; Passage=4
-0.6
-0.4
+0.4
-0.9
+1.2
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-0.6
-0.3
+0.0
+0.6
complex community
Community=arabino-guar; Passage=4
+0.0
-0.8
+0.2
-0.8
+1.2
phage
phage_bap4
+0.0
+0.4
+0.2
+0.1
-0.5
complex community
Community=arabino-guar; Passage=4
+0.0
+0.3
+0.3
+0.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.2
-0.2
-0.1
+0.7
complex community
Community=guar; Passage=4
+0.0
-0.7
-0.2
+0.0
+1.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.1
+0.3
-0.2
+0.3
complex community
Community=Kojac gum; Passage=4
-0.2
-0.0
+1.7
-0.5
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.3
+0.0
-0.1
+1.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.2
+0.1
+0.1
+0.9
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.1
+0.0
+0.3
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.2
+0.6
-0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
+0.2
+0.0
-0.1
+1.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.1
+0.1
+0.3
+0.7
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.0
+0.5
-0.0
+0.8
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.1
+0.1
+0.1
+1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.0
+0.3
+0.2
+0.9
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
+0.2
-0.1
+0.2
+1.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.3
+0.6
-0.0
+0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.1
+0.3
+0.3
+0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.4
+0.2
+0.2
+0.9
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