Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_23435	PS417_23440	PS417_23445	PS417_23450	PS417_23455
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.5	+0.4	-0.3	-0.3	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.6	-0.5	-0.2	-0.3
carbon source	D-Lactate (C)	-0.2	-0.1	-0.4	-0.5	-0.6
solid stress	Fraxetin 3 mM; solid stress	-0.5	-0.3	-0.3	-0.4	-0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	+0.1	-0.4	-0.6	-0.4
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.3	+0.2	-0.2	+0.1	-1.4
carbon source	L-Valine (C)	+0.5	+0.2	-0.8	-0.6	-0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.4	-0.8	-0.3	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	+0.0	-1.1	-0.5	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.2	-0.8	+0.6	-0.8
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.6	-0.2	-0.6	-0.4	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4	+0.1	-0.0	-0.3	+0.9
soil	soil sample 3; outgrowth in LB	-0.4	+0.1	-1.0	+0.0	+0.7
root	root sample 6; outgrowth in LB	+0.3	-0.2	-0.8	+0.3	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.1	-0.3	-0.7	+0.4
phage	JP1 MOI 10	+0.4	+0.1	+0.3	-0.4	-0.7
supernatant control	Vogels_fungal_media 0.1X	-0.1	+0.4	-0.4	+0.4	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	+0.4	-0.5	+0.2	-0.7
phage	JP1 MOI 1	+0.3	-0.1	+0.5	+0.2	-1.0
phage	P. simiae ORA MOI 10	-0.2	+0.1	-0.4	-0.3	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	+0.2	-0.5	-0.1	+0.9
phage	P. simiae OR1 MOI 0.1	-0.7	+0.2	+0.2	-0.4	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7	+0.4	-0.1	+0.4	+0.3
seeds	Growth on radish seeds for 72 hours	+0.7	-0.2	+0.4	+0.2	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	+0.1	+0.2	+0.2	-0.7
carbon source	L-Valine (C)	+0.5	+0.1	-0.3	+0.9	-0.1
phage	Wcs_1	+0.3	+0.1	+0.6	+0.5	-0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.5	+0.1	+0.3	+0.1	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	-0.2	+0.3	-0.0	+2.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.3	+0.2	+0.7	+0.8