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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4578 and GFF4579 are separated by 74 nucleotides
GFF4579 and GFF4580 are separated by 3 nucleotides
GFF4580 and GFF4581 are separated by 4 nucleotides
GFF4581 and GFF4582 are separated by 62 nucleotides
GFF4578 - hypothetical protein, at 4,570,360 to 4,570,695
GFF4578
GFF4579 - CzcABC family efflux RND transporter, outer membrane protein, at 4,570,770 to 4,572,032
GFF4579
GFF4580 - CzcABC family efflux RND transporter, membrane fusion protein, at 4,572,036 to 4,573,193
GFF4580
GFF4581 - CzcABC family efflux RND transporter, transmembrane protein, at 4,573,198 to 4,576,425
GFF4581
GFF4582 - hypothetical protein, at 4,576,488 to 4,576,982
GFF4582
Group
Condition
GFF4578
GFF4579
GFF4580
GFF4581
GFF4582
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.4
-0.2
-0.3
-1.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.6
-0.6
-0.4
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.2
-0.2
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.2
-0.3
-0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.3
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.2
-0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.2
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
-0.2
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.3
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.1
-0.2
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
-0.1
-0.1
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
+0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.1
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.1
-0.1
-0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.1
+0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.0
-0.1
-0.0
+0.1
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