Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF4578 and GFF4579 overlap by 4 nucleotidesGFF4579 and GFF4580 are separated by 11 nucleotidesGFF4580 and GFF4581 are separated by 388 nucleotidesGFF4581 and GFF4582 are separated by 552 nucleotides GFF4578 - Cysteine synthase (EC 2.5.1.47), at 1,520,404 to 1,521,324 GFF4578 GFF4579 - Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12), at 1,521,321 to 1,521,743 GFF4579 GFF4580 - Selenoprotein O and cysteine-containing homologs, at 1,521,755 to 1,523,224 GFF4580 GFF4581 - hypothetical protein, at 1,523,613 to 1,524,209 GFF4581 GFF4582 - Sensory box histidine kinase/response regulator, at 1,524,762 to 1,527,239 GFF4582
Group Condition GFF4578 GFF4579 GFF4580 GFF4581 GFF4582
carbon source Ying_Nucleobase14 rep A; time point 2 +0.0 -1.1 -0.3 -0.1 +0.0
carbon source Ying_all64 rep C; time point 2 -0.2 -0.8 -0.0 -0.2 -0.1
carbon source Ying_Nucleobase14 rep C; time point 2 +0.1 -0.8 -0.3 -0.1 -0.2
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 -0.8 -0.1 -0.1 -0.1
carbon source Ying_Nucleobase14 rep A; time point 1 +0.1 -0.8 -0.1 -0.1 -0.0
carbon source Ying_Others16 rep B; time point 1 -0.2 -0.4 -0.1 -0.2 +0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -0.1 -0.7 +0.0 -0.1 -0.1
carbon source Ying_all64 rep C; time point 3 -0.3 -0.4 +0.1 -0.3 +0.0
carbon source Ying_sugar7 rep B; time point 2 -0.3 -0.4 -0.0 -0.1 +0.0
carbon source Ying_all64 rep C; time point 1 -0.0 -0.3 -0.1 -0.3 -0.1
carbon source Ying_Others16 rep A; time point 2 +0.2 -0.6 -0.1 -0.1 -0.1
carbon source Ying_Others16 rep A; time point 1 -0.3 -0.3 -0.1 +0.0 -0.0
carbon source Ying_Nucleobase14 rep B; time point 2 -0.3 -0.2 -0.2 +0.1 -0.0
carbon source Ying_Nucleobase14 rep B; time point 1 -0.3 -0.4 -0.1 -0.1 +0.0
carbon source Ying_all64 rep B; time point 2 -0.2 -0.4 +0.1 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.0 -0.6 +0.1 -0.2 -0.0
carbon source Ying_all64 rep B; time point 1 -0.1 -0.4 +0.2 -0.2 -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 -0.4 +0.3 -0.1 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.2 -0.3 -0.2 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.1 -0.4 +0.1 -0.0 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 +0.2 -0.3 +0.0 -0.2 -0.1
carbon source Ying_sugar7 rep A; time point 2 +0.2 -0.4 -0.0 +0.1 -0.1
carbon source Ying_sugar7 rep B; time point 3 -0.0 +0.4 -0.2 -0.2 -0.1
carbon source Ying_Others16 rep C; time point 2 +0.2 -0.0 -0.2 -0.1 -0.0
carbon source Ying_AminoAcid20 rep C; time point 1 +0.2 -0.1 +0.0 -0.2 -0.1
carbon source Ying_Others16 rep A; time point 3 -0.3 +0.1 -0.0 +0.1 +0.1
carbon source Ying_all64 rep A; time point 3 -0.1 +0.5 +0.0 -0.2 -0.0
carbon source Ying_sugar7 rep C; time point 2 +0.4 -0.2 -0.2 +0.2 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.2 +0.5 -0.1 -0.0 -0.0
carbon source Ying_all64 rep B; time point 3 +0.2 +0.5 +0.0 -0.1 -0.1
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