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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4574 and GFF4575 overlap by 32 nucleotides
GFF4575 and GFF4576 are separated by 157 nucleotides
GFF4576 and GFF4577 overlap by 4 nucleotides
GFF4577 and GFF4578 are separated by 58 nucleotides
GFF4574 - Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE, at 360,386 to 361,975
GFF4574
GFF4575 - Magnesium and cobalt efflux protein CorC, at 361,944 to 362,822
GFF4575
GFF4576 - Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly, at 362,980 to 363,453
GFF4576
GFF4577 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 363,450 to 364,496
GFF4577
GFF4578 - hypothetical protein, at 364,555 to 364,674
GFF4578
Group
Condition
GFF4574
GFF4575
GFF4576
GFF4577
GFF4578
micoeukaryotes
C.elegans, mixed culture-1
N.D.
-2.6
N.D.
-0.2
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-1
N.D.
-2.1
N.D.
-0.5
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
N.D.
-2.2
N.D.
-0.2
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-1
N.D.
-1.8
N.D.
-0.5
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-2
N.D.
-2.1
N.D.
-0.1
N.D.
micoeukaryotes
C.elegans, mixed culture-2
N.D.
-1.9
N.D.
-0.0
N.D.
phage
phi19h1_phage 15 MOI
N.D.
-1.4
N.D.
-0.3
N.D.
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
N.D.
-0.8
N.D.
+0.1
N.D.
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
N.D.
-0.9
N.D.
+0.3
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
-0.9
N.D.
+0.5
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
-0.6
N.D.
+0.3
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
-0.7
N.D.
+0.4
N.D.
phage
Br60_phage 15 MOI
N.D.
-0.6
N.D.
+0.3
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
N.D.
-0.5
N.D.
+0.4
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
-0.6
N.D.
+0.5
N.D.
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
-0.7
N.D.
+0.7
N.D.
phage
phi19h1_phage 15 MOI
N.D.
-0.6
N.D.
+0.7
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
-0.4
N.D.
+0.6
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
N.D.
+0.7
N.D.
-0.5
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
N.D.
+0.8
N.D.
-0.4
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
N.D.
+0.7
N.D.
-0.3
N.D.
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
-0.2
N.D.
+0.9
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
N.D.
+0.8
N.D.
-0.0
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
N.D.
+0.8
N.D.
+0.0
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
N.D.
+0.5
N.D.
+0.3
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
N.D.
+0.2
N.D.
+0.8
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
+0.3
N.D.
+0.9
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
N.D.
+0.8
N.D.
+0.5
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
N.D.
+1.0
N.D.
+1.0
N.D.
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
+2.6
N.D.
+0.3
N.D.
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