Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_23405	PS417_23410	PS417_23415	PS417_23420	PS417_23425
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-1.4	-1.4	-0.3	+0.1
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.3	-0.2	+0.1	-0.8	-0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	-1.1	-0.7	+0.3	+0.1
phage	P. simiae Grant Run MOI 10	-1.0	-0.4	-0.3	-0.3	+0.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	-1.2	-0.5	-0.4	+0.0
carbon source	2'-Deoxyinosine 5 mM (C)	-1.2	-0.3	+0.0	-0.1	-0.1
phage	JP1 MOI 1	-0.6	-0.6	+0.1	-0.5	+0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5	-1.3	-1.3	+1.0	-0.1
phage	P. simiae OR Antrim MOI 0.1	+0.5	-0.5	-0.2	-0.7	-0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9	-0.8	-0.9	-0.3	+0.1
seeds	Growth on radish seeds for 72 hours	-0.7	-0.2	+1.0	-0.3	-0.0
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.6	-0.4	-0.6	-0.1	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.6	+0.5	-0.4	+0.4	-0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.6	+0.6	-0.3	+0.5	-0.1
carbon source	Carbon source D-Mannitol 5 mM	-0.9	+0.2	+0.4	+0.5	+0.1
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.7	-0.5	-0.1	+0.5	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1	+0.1	-0.2	-0.5	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.6	-0.5	-0.2	+0.1	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7	+0.7	+0.0	+0.9	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9	-0.5	+0.4	+0.1	+0.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.5	-0.3	+1.9	+0.1	-0.0
carbon source	L-Valine (C)	+0.9	+0.4	-0.2	-0.1	+0.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.3	-0.3	+1.2	+0.3	-0.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.4	-0.1	+1.1	-0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.9	+0.3	-0.0	+0.5	+0.3
soil	soil sample 4; outgrowth in LB	+0.8	+0.3	+0.7	+0.2	-0.0
seeds	Growth on radish seeds for 72 hours	+0.2	+0.3	+0.4	+1.1	+0.2
stress	Paraquat dichloride 0.008 mg/ml	+0.8	+0.6	+0.3	+0.4	+0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	-0.4	+0.9	+0.6	+0.2
soil	soil sample 5; outgrowth in LB	+0.9	+0.5	+0.8	+0.5	+0.0