Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4565 and GFF4566 are separated by 280 nucleotidesGFF4566 and GFF4567 are separated by 28 nucleotidesGFF4567 and GFF4568 are separated by 139 nucleotidesGFF4568 and GFF4569 are separated by 31 nucleotides GFF4565 - GGDEF domain protein, at 200,340 to 201,827 GFF4565 GFF4566 - hypothetical protein, at 202,108 to 203,457 GFF4566 GFF4567 - Transcriptional regulator, LysR family, at 203,486 to 204,379 GFF4567 GFF4568 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 204,519 to 206,654 GFF4568 GFF4569 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 206,686 to 207,876 GFF4569
Group Condition GFF4565 GFF4566 GFF4567 GFF4568 GFF4569
phage phage_bap4 -0.1 -0.1 -0.1 -0.4 -0.1
complex community Community=arabino-guar; Passage=4 -0.2 -0.0 -0.1 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.4 -0.1 -0.6
phage phage_bap4 -0.1 -0.1 -0.1 -0.1 +0.1
complex community Community=Locust bean gum; Passage=1 -0.1 +0.0 +0.2 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 -0.2 -0.6 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 -0.2 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 +0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 -0.0 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.1 +0.1 -0.1 +0.1
phage phage_bap4 +0.1 -0.1 +0.2 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.0 -0.1 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.1 +0.2 -0.1 +0.2
complex community Community=Kojac gum; Passage=4 -0.2 +0.1 +0.3 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.0 -0.1 +0.0 +0.3
complex community Community=guar; Passage=4 -0.1 -0.2 +0.3 +0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 +0.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.1 +0.2 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.0 +0.3 +0.4 -0.2 -0.2
complex community Community=guar; Passage=4 -0.2 +0.4 +0.2 +0.0 -0.0
complex community Community=arabino-guar; Passage=4 +0.1 +0.1 +0.3 -0.2 +0.0
complex community Community=Kojac gum; Passage=1 -0.1 +0.0 +0.1 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 -0.1 +0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.1 +0.3 -0.0 +0.1
complex community Community=guar; Passage=4 -0.1 -0.0 +0.2 +0.1 +0.3
complex community Community=guar; Passage=4 +0.0 -0.0 +0.4 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.1 +0.2 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.0 +0.2 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.0 +0.2 +0.2 +0.3 +0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.1 +0.3 +0.1 +0.3
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