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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4565 and GFF4566 overlap by 4 nucleotides
GFF4566 and GFF4567 are separated by 92 nucleotides
GFF4567 and GFF4568 are separated by 2 nucleotides
GFF4568 and GFF4569 are separated by 14 nucleotides
GFF4565 - hypothetical protein, at 4,558,343 to 4,558,456
GFF4565
GFF4566 - Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) / ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 4,558,453 to 4,559,541
GFF4566
GFF4567 - hypothetical membrane associated protein, at 4,559,634 to 4,560,173
GFF4567
GFF4568 - hypothetical protein, at 4,560,176 to 4,561,396
GFF4568
GFF4569 - OmpA/MotB, at 4,561,411 to 4,561,902
GFF4569
Group
Condition
GFF4565
GFF4566
GFF4567
GFF4568
GFF4569
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.1
-0.1
-0.3
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.2
-0.4
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.7
-0.2
-0.3
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.1
-0.5
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.7
-0.1
-0.2
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.8
-0.2
-0.3
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
-0.9
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.0
-0.1
-0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.9
+0.0
-0.3
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.1
-0.3
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.0
-0.4
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
-0.4
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.2
-0.3
-0.3
-0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.1
-0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.0
-0.3
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.1
-0.2
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
-0.4
-0.1
-0.0
-0.3
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