Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4555 and GFF4556 overlap by 4 nucleotidesGFF4556 and GFF4557 overlap by 4 nucleotidesGFF4557 and GFF4558 overlap by 4 nucleotidesGFF4558 and GFF4559 are separated by 3 nucleotides GFF4555 - Putative transmembrane protein, at 192,074 to 192,829 GFF4555 GFF4556 - hypothetical protein, at 192,826 to 193,626 GFF4556 GFF4557 - Dihydroorotase (EC 3.5.2.3), at 193,623 to 194,654 GFF4557 GFF4558 - RNA polymerase ECF-type sigma factor, at 194,651 to 195,193 GFF4558 GFF4559 - Uncharacterized membrane protein Rmet_3714, at 195,197 to 195,406 GFF4559
Group Condition GFF4555 GFF4556 GFF4557 GFF4558 GFF4559
complex community Community=guar; Passage=4 -0.2 -0.1 -4.0 -1.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.6 +0.1 -3.6 -1.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.7 -0.1 -3.7 -1.9 N.D.
complex community Community=Kojac gum; Passage=4 -0.5 -0.2 -3.9 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 +0.3 -0.4 -4.1 -0.1 N.D.
complex community Community=guar; Passage=4 -0.5 +0.3 -4.3 +0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 -4.1 +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 -4.1 +0.0 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -4.4 +0.5 N.D.
complex community Community=Locust bean gum; Passage=4 +0.1 +0.4 -3.7 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 +0.5 -0.1 -4.1 +0.5 N.D.
complex community Community=guar; Passage=4 +0.2 +0.4 -4.0 +0.5 N.D.
complex community Community=guar; Passage=4 +0.2 +0.3 -4.0 +0.7 N.D.
no phage control no phage control -0.1 -0.0 -1.7 -0.3 N.D.
phage phage_bap4 +0.2 +0.0 -1.7 -0.4 N.D.
phage phage_bap4 -0.1 +0.1 -1.9 +0.2 N.D.
phage phage_bap4 -0.5 +0.2 -1.2 -0.2 N.D.
no phage control no phage control +0.1 +0.2 -1.6 -0.3 N.D.
phage phage_bap4 +0.0 +0.3 -1.6 -0.3 N.D.
no phage control no phage control +0.1 +0.1 -2.0 +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.1 -1.5 +0.0 N.D.
phage phage_bap4 -0.1 +0.3 -1.4 -0.2 N.D.
no phage control no phage control -0.0 +0.2 -1.5 +0.0 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 -0.6 -0.5 N.D.
phage phage_bap4 -0.0 +0.1 -1.5 +0.2 N.D.
phage phage_bap4 +0.1 +0.2 -1.3 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -1.0 +0.2 N.D.
phage phage_bap4 +0.2 +0.2 -1.1 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.5 +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.2 -0.6 +0.5 N.D.
remove
GFF4555
plot		 remove
GFF4556
plot		 remove
GFF4557		 remove
GFF4558
plot		 remove
GFF4559
plot