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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4550 and GFF4551 overlap by 8 nucleotides
GFF4551 and GFF4552 are separated by 5 nucleotides
GFF4552 and GFF4553 are separated by 46 nucleotides
GFF4553 and GFF4554 are separated by 79 nucleotides
GFF4550 - hypothetical protein, at 4,541,353 to 4,542,078
GFF4550
GFF4551 - hypothetical protein, at 4,542,071 to 4,542,598
GFF4551
GFF4552 - Glycosyltransferase, at 4,542,604 to 4,543,827
GFF4552
GFF4553 - hypothetical protein, at 4,543,874 to 4,544,599
GFF4553
GFF4554 - Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily, at 4,544,679 to 4,546,211
GFF4554
Group
Condition
GFF4550
GFF4551
GFF4552
GFF4553
GFF4554
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.3
-0.8
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.3
-0.4
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.3
-0.4
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.3
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.5
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
-0.1
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.3
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.3
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
-0.2
-0.1
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.2
-0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.1
-0.1
-0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.2
-0.0
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.0
-0.0
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.3
-0.0
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.2
-0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.0
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.0
+0.0
-0.2
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