Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4548 and GFF4549 are separated by 71 nucleotidesGFF4549 and GFF4550 are separated by 36 nucleotidesGFF4550 and GFF4551 overlap by 1 nucleotidesGFF4551 and GFF4552 are separated by 8 nucleotides GFF4548 - Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12), at 185,552 to 186,070 GFF4548 GFF4549 - Cysteine synthase (EC 2.5.1.47), at 186,142 to 187,062 GFF4549 GFF4550 - NAD(FAD)-utilizing dehydrogenase, sll0175 homolog, at 187,099 to 188,784 GFF4550 GFF4551 - Putative preQ0 transporter YhhQ, at 188,784 to 189,353 GFF4551 GFF4552 - Nitrilotriacetate monooxygenase component B (EC 1.14.13.-), at 189,362 to 189,991 GFF4552
Group Condition GFF4548 GFF4549 GFF4550 GFF4551 GFF4552
complex community Community=Locust bean gum; Passage=4 +0.1 -1.0 +0.0 -0.8 +0.1
complex community Community=arabino-guar; Passage=4 -1.4 -0.2 +0.1 -0.1 +0.3
complex community Community=guar; Passage=4 -0.5 -0.8 -0.1 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.3 -0.0 -0.2 -0.9 +0.3
complex community Community=arabino-guar; Passage=4 -0.5 +0.2 -0.2 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 -0.8 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.3 +0.1 +0.2 +0.0
complex community Community=Locust bean gum; Passage=1 +0.3 -0.1 -0.1 -0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -0.6 +0.2 -0.0 +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 -0.0 +0.1 +0.5 -0.2
phage phage_bap4 +0.4 -0.2 -0.0 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.3 +0.1 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.6 +0.9 -0.3 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.2 -0.0 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 +0.1 +0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.2 -0.0 +0.1 -0.3
phage phage_bap4 +0.7 -0.1 +0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.2 +0.1 +0.6 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.2 +0.1 +0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.3 +0.2 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 +0.1 +0.5 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.4 +0.1 +0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.1 +0.2 +0.6 -0.1
no phage control no phage control +0.6 -0.1 +0.1 +0.2 -0.0
phage phage_bap4 +0.5 +0.2 +0.0 +0.0 -0.0
complex community Community=guar; Passage=4 +0.2 +0.3 -0.1 +0.4 +0.2
phage phage_bap4 +0.7 +0.2 +0.1 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.4 +0.2 +0.5 +0.2
complex community Community=Kojac gum; Passage=4 +0.8 +1.0 -0.3 -0.6 +0.2
complex community Community=guar; Passage=4 +1.2 +0.4 -0.2 -0.0 +0.4
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