Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_23210 and PS417_23215 are separated by 2 nucleotidesPS417_23215 and PS417_23220 are separated by 145 nucleotidesPS417_23220 and PS417_23225 are separated by 58 nucleotidesPS417_23225 and PS417_23230 are separated by 123 nucleotides PS417_23210: PS417_23210 - serine acetyltransferase, at 5,027,859 to 5,028,641 _23210 PS417_23215: PS417_23215 - RNA methyltransferase, at 5,028,644 to 5,029,414 _23215 PS417_23220: PS417_23220 - inositol monophosphatase, at 5,029,560 to 5,030,375 _23220 PS417_23225: PS417_23225 - hypothetical protein, at 5,030,434 to 5,030,976 _23225 PS417_23230: PS417_23230 - preprotein translocase subunit SecF, at 5,031,100 to 5,032,014 _23230
Group Condition PS417_23210 PS417_23215 PS417_23220 PS417_23225 PS417_23230
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.8 -0.7 N.D. -0.7 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 -0.3 N.D. +0.2 N.D.
phage JP1 MOI 10 -2.1 -0.6 N.D. +0.0 N.D.
phage P. simiae OR Antrim MOI 1 -1.4 -1.0 N.D. -0.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -2.3 +0.0 N.D. -0.0 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -0.6 N.D. +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -0.3 N.D. +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -0.4 N.D. -0.1 N.D.
seeds Growth on radish seeds for 72 hours -1.4 -0.6 N.D. +0.1 N.D.
phage P. simiae OR Antrim MOI 0.1 -1.0 -0.9 N.D. -0.0 N.D.
phage P. simiae OR Antrim MOI 10 -0.9 -0.7 N.D. -0.3 N.D.
soil soil sample 5; outgrowth in LB -2.1 +0.3 N.D. +0.2 N.D.
seeds Growth on radish seeds for 72 hours -1.6 -0.0 N.D. +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 +0.1 N.D. +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -0.3 N.D. +0.2 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 +0.3 N.D. -0.4 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 +0.2 N.D. +0.1 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 -1.3 N.D. +0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 +0.6 N.D. +0.2 N.D.
stress Gentamicin 0.008 mg/ml -1.3 +0.5 N.D. +0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 +0.8 N.D. +0.1 N.D.
root root sample 6; outgrowth in LB -0.8 +0.6 N.D. +0.3 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 -0.7 N.D. -0.1 N.D.
carbon source L-Valine (C) +1.3 -0.3 N.D. +0.7 N.D.
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +0.0 N.D. +0.6 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +2.3 -0.4 N.D. -0.1 N.D.
stress methylglyoxal 0.032 vol% +1.9 +0.8 N.D. -0.2 N.D.
carbon source Trisodium citrate (C) +4.5 +1.7 N.D. -0.0 N.D.
carbon source Trisodium citrate (C) +4.9 +2.1 N.D. +0.2 N.D.
stress Cobalt chloride 0.16 mM +7.3 +0.9 N.D. +0.2 N.D.
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