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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4529 and GFF4530 are separated by 38 nucleotides
GFF4530 and GFF4531 overlap by 4 nucleotides
GFF4531 and GFF4532 are separated by 47 nucleotides
GFF4532 and GFF4533 are separated by 44 nucleotides
GFF4529 - Alanyl dipeptidyl peptidase, at 4,518,278 to 4,520,338
GFF4529
GFF4530 - hypothetical protein, at 4,520,377 to 4,520,592
GFF4530
GFF4531 - Predicted kinase, at 4,520,589 to 4,521,185
GFF4531
GFF4532 - Valyl-tRNA synthetase (EC 6.1.1.9), at 4,521,233 to 4,524,085
GFF4532
GFF4533 - Na+-driven multidrug efflux pump, at 4,524,130 to 4,525,581
GFF4533
Group
Condition
GFF4529
GFF4530
GFF4531
GFF4532
GFF4533
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-1.1
-0.2
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-1.4
+0.2
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.7
-0.5
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.9
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.9
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.8
-0.2
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.6
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.6
-0.1
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.4
-0.1
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.1
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.4
-0.1
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.5
+0.0
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.2
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.5
+0.0
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
+0.1
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.2
-0.0
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.1
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
+0.1
N.D.
-0.2
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