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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4527 and GFF4528 are separated by 69 nucleotides
GFF4528 and GFF4529 are separated by 141 nucleotides
GFF4529 and GFF4530 are separated by 38 nucleotides
GFF4530 and GFF4531 overlap by 4 nucleotides
GFF4527 - Type I secretion outer membrane protein, TolC family, at 4,516,136 to 4,517,578
GFF4527
GFF4528 - Cell division organizing protein PopZ, at 4,517,648 to 4,518,136
GFF4528
GFF4529 - Alanyl dipeptidyl peptidase, at 4,518,278 to 4,520,338
GFF4529
GFF4530 - hypothetical protein, at 4,520,377 to 4,520,592
GFF4530
GFF4531 - Predicted kinase, at 4,520,589 to 4,521,185
GFF4531
Group
Condition
GFF4527
GFF4528
GFF4529
GFF4530
GFF4531
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.1
-0.3
-1.4
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.2
-0.1
-0.7
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.1
-0.3
-0.9
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.3
-0.2
-1.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.1
-0.0
-0.8
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
-0.3
-0.6
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.4
-0.2
-0.9
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.2
-0.1
-0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
-0.1
-0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
-0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.3
-0.0
-0.5
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.5
-0.1
-0.6
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.3
-0.3
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.4
-0.1
-0.5
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
+0.4
-0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
-0.4
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.3
-0.2
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.3
-0.1
+0.1
+0.1
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