Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4516 and GFF4517 are separated by 124 nucleotidesGFF4517 and GFF4518 are separated by 57 nucleotidesGFF4518 and GFF4519 are separated by 22 nucleotidesGFF4519 and GFF4520 are separated by 39 nucleotides GFF4516 - hypothetical protein, at 156,280 to 157,356 GFF4516 GFF4517 - Uncharacterized MFS-type transporter YtbD, at 157,481 to 158,683 GFF4517 GFF4518 - Methylglyoxal reductase, dihydroxyacetone producing @ 2,5-didehydrogluconate reductase (2-dehydro-L-gulonate-forming) (EC 1.1.1.346), at 158,741 to 159,565 GFF4518 GFF4519 - no description, at 159,588 to 159,929 GFF4519 GFF4520 - hypothetical protein, at 159,969 to 160,391 GFF4520
Group Condition GFF4516 GFF4517 GFF4518 GFF4519 GFF4520
complex community Community=arabino-guar; Passage=4 -0.3 -0.1 -0.1 +0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.1 -0.5 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.3 -0.5 -0.1 +0.0
complex community Community=guar; Passage=4 +0.1 +0.1 -0.4 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 +0.1 +0.0 +0.1
complex community Community=Locust bean gum; Passage=1 -0.2 -0.0 +0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.0 +0.0 -0.2 +0.2
phage phage_bap4 -0.0 +0.0 +0.1 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.0 +0.3 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.0 +0.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 +0.0 +0.0 -0.1
complex community Community=guar; Passage=4 +0.1 +0.1 -0.2 +0.1 +0.2
phage phage_bap4 +0.0 -0.0 +0.1 -0.1 +0.3
no phage control no phage control -0.1 +0.0 +0.1 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 +0.3 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.1 -0.0 +0.2 +0.1
phage phage_bap4 +0.1 +0.1 +0.1 +0.3 -0.0
complex community Community=Locust bean gum; Passage=4 -0.0 +0.2 +0.1 -0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.0 +0.1 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.0 +0.1 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.2 +0.1 +0.3
phage phage_bap4 +0.1 +0.1 +0.1 +0.2 +0.0
complex community Community=guar; Passage=4 +0.2 -0.0 +0.0 +0.1 +0.3
phage phage_bap4 +0.2 +0.1 +0.1 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.1 +0.3 +0.3
complex community Community=Kojac gum; Passage=4 +0.2 +0.2 +0.0 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.0 -0.1 +0.2 +0.7
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 -0.3 +0.4 +0.4
complex community Community=guar; Passage=4 +0.0 +0.1 +0.4 +0.2 +0.6
phage phage_bap4 +0.2 +0.2 +0.2 +0.4 +0.4
remove
GFF4516
plot		 remove
GFF4517
plot		 remove
GFF4518		 remove
GFF4519
plot		 remove
GFF4520
plot