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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4514 and GFF4515 are separated by 331 nucleotides
GFF4515 and GFF4516 are separated by 223 nucleotides
GFF4516 and GFF4517 overlap by 4 nucleotides
GFF4517 and GFF4518 overlap by 1 nucleotides
GFF4514 - Alkyl hydroperoxide reductase protein F (EC 1.6.4.-), at 301,468 to 303,033
GFF4514
GFF4515 - Putative oxidoreductase component of anaerobic dehydrogenases; Chaperone protein TorD, at 303,365 to 303,925
GFF4515
GFF4516 - Putative oxidoreductase STM0611-0613, chain A, at 304,149 to 306,197
GFF4516
GFF4517 - Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3), at 306,194 to 306,751
GFF4517
GFF4518 - Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3), at 306,751 to 307,518
GFF4518
Group
Condition
GFF4514
GFF4515
GFF4516
GFF4517
GFF4518
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.2
N.D.
-0.4
-0.0
-0.3
phage
Ffm_phage 10 MOI; agar plate assay
-0.2
N.D.
-0.2
-0.1
-0.2
lb_plus_sm_buffer
LB_plus_SM_buffer
+0.0
N.D.
-0.1
-0.3
-0.3
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
-0.2
N.D.
-0.1
-0.2
-0.1
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
-0.1
N.D.
-0.1
-0.4
+0.0
phage
phi19h1_phage 15 MOI
-0.1
N.D.
-0.2
-0.2
+0.0
phage
Br60_phage 15 MOI
-0.1
N.D.
-0.1
-0.2
-0.1
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.5
N.D.
+0.1
-0.6
-0.5
phage
Br60_phage 15 MOI
-0.2
N.D.
+0.1
-0.0
-0.2
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.0
N.D.
-0.1
+0.2
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.3
N.D.
-0.2
-0.2
-0.0
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.0
N.D.
+0.2
-0.3
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.2
N.D.
-0.1
-0.2
+0.2
phage
6H2_phage 10 MOI; agar plate assay
-0.5
N.D.
+0.1
+0.2
+0.3
phage
LB_plus_SM_buffer with phi19h1_phage 15 MOI
+0.1
N.D.
-0.2
+0.3
-0.1
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
+0.2
N.D.
-0.1
-0.3
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.2
N.D.
+0.2
+0.2
-0.1
micoeukaryotes
C.elegans, mixed culture-2
+0.0
N.D.
-0.0
+0.3
-0.1
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.2
N.D.
-0.1
+0.1
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
-0.2
N.D.
+0.2
+0.1
+0.2
phage
6F2_phage 15 MOI
-0.1
N.D.
+0.1
-0.1
+0.4
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.1
N.D.
+0.1
+0.1
+0.3
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.1
N.D.
+0.2
+0.2
-0.1
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.3
N.D.
-0.0
-0.1
+0.2
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.3
N.D.
+0.2
+0.3
-0.3
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
+0.2
N.D.
-0.0
-0.0
+0.3
micoeukaryotes
Dictyostellum sp.mixed culture-2
-0.0
N.D.
+0.1
+0.4
-0.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.4
N.D.
-0.0
+0.1
-0.0
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.3
N.D.
-0.0
+0.4
+0.2
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.6
N.D.
+0.2
+0.1
+1.7
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