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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4503 and GFF4504 are separated by 2 nucleotides
GFF4504 and GFF4505 are separated by 181 nucleotides
GFF4505 and GFF4506 are separated by 63 nucleotides
GFF4506 and GFF4507 are separated by 35 nucleotides
GFF4503 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) of siderophore biosynthesis, at 290,135 to 290,890
GFF4503
GFF4504 - Proofreading thioesterase in enterobactin biosynthesis EntH, at 290,893 to 291,306
GFF4504
GFF4505 - Carbon starvation protein A, at 291,488 to 293,593
GFF4505
GFF4506 - COG2879, Hypothetical small protein yjiX, at 293,657 to 293,854
GFF4506
GFF4507 - Glycerol dehydrogenase (EC 1.1.1.6), at 293,890 to 294,978
GFF4507
Group
Condition
GFF4503
GFF4504
GFF4505
GFF4506
GFF4507
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-1.1
-0.6
-0.1
-0.1
-0.7
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
-0.5
-0.3
-0.1
-0.0
-0.1
phage
Br60_phage 15 MOI
+0.1
-0.7
+0.0
-0.2
-0.2
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
-0.3
-0.7
-0.1
-0.1
+0.3
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.8
-0.9
-0.3
+0.3
-0.7
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-1.2
+0.3
+0.1
-0.1
+0.2
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.5
+0.4
-0.4
-0.2
+0.1
phage
6F2_phage 15 MOI
-0.4
-0.2
+0.1
+0.0
-0.1
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.3
+0.1
-0.1
-0.4
+0.3
phage
Ffm_phage 10 MOI; agar plate assay
-0.3
-0.0
+0.2
-0.3
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
-0.3
+0.3
-0.1
-0.1
+0.2
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
-0.4
+0.3
-0.2
+0.0
+0.2
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.2
+0.2
-0.3
+0.2
+0.1
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.4
-0.3
-0.1
+0.3
-0.2
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.3
+0.3
-0.3
+0.4
+0.0
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.3
+0.6
-0.1
+0.1
+0.0
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.2
+0.6
-0.2
+0.2
-0.0
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-0.4
-0.4
+0.3
+0.2
+0.6
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
+0.1
+0.4
+0.3
-0.2
-0.0
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.2
+0.7
+0.1
+0.2
-0.1
phage
LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI
-0.1
+0.4
-0.0
+0.4
-0.1
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
+0.3
+0.2
+0.2
-0.1
+0.2
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.1
+0.6
-0.2
+0.3
+0.1
phage
6F2_phage 15 MOI
+0.3
+0.0
+0.2
+0.0
+0.4
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.0
+0.8
+0.0
+0.2
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.0
+0.4
+0.2
+0.3
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.2
+0.6
+0.2
+0.4
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.3
+0.6
+0.1
+0.4
+0.6
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.2
+0.4
+0.2
+0.4
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.6
+0.4
+0.2
+0.5
+0.5
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