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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4491 and GFF4492 are separated by 85 nucleotides
GFF4492 and GFF4493 are separated by 313 nucleotides
GFF4493 and GFF4494 are separated by 104 nucleotides
GFF4494 and GFF4495 overlap by 4 nucleotides
GFF4491 - Putative type II restriction enzyme NmeDIP (EC 3.1.21.4) (Endonuclease NmeDIP) (R.NmeDIP), at 4,482,602 to 4,483,900
GFF4491
GFF4492 - Flagellar biosynthesis protein FliQ, at 4,483,986 to 4,484,258
GFF4492
GFF4493 - Thioredoxin reductase (EC 1.8.1.9), at 4,484,572 to 4,485,459
GFF4493
GFF4494 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 4,485,564 to 4,487,933
GFF4494
GFF4495 - Protein formerly called heavy metal resistance transcriptional regulator HmrR, at 4,487,930 to 4,488,316
GFF4495
Group
Condition
GFF4491
GFF4492
GFF4493
GFF4494
GFF4495
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.2
+0.4
+0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
-0.1
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
+0.3
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.0
+0.4
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.2
+0.4
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.2
+0.2
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.0
+0.4
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.3
+0.3
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.3
+0.5
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.3
+0.3
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.1
+0.5
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.4
+0.2
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.1
+0.4
+0.2
+0.7
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.5
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.5
+0.3
+0.4
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
+0.3
+0.4
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.3
+0.5
+0.4
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.6
+0.4
+0.4
+0.5
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