Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4490 and GFF4491 overlap by 26 nucleotidesGFF4491 and GFF4492 overlap by 4 nucleotidesGFF4492 and GFF4493 overlap by 4 nucleotidesGFF4493 and GFF4494 are separated by 80 nucleotides GFF4490 - Site-specific tyrosine recombinase XerC, at 135,454 to 136,470 GFF4490 GFF4491 - no description, at 136,445 to 137,080 GFF4491 GFF4492 - Protein of unknown function DUF484, at 137,077 to 137,781 GFF4492 GFF4493 - Diaminopimelate epimerase (EC 5.1.1.7), at 137,778 to 138,662 GFF4493 GFF4494 - hypothetical protein, at 138,743 to 139,057 GFF4494
Group Condition GFF4490 GFF4491 GFF4492 GFF4493 GFF4494
complex community Community=Locust bean gum; Passage=4 -3.0 +0.4 -2.6 N.D. -0.5
complex community Community=arabino-guar; Passage=4 -2.4 +0.3 -2.7 N.D. -0.8
complex community Community=guar; Passage=4 -2.6 +0.1 -2.4 N.D. -0.3
complex community Community=arabino-guar; Passage=4 -2.3 +0.2 -3.1 N.D. +0.5
complex community Community=Kojac gum; Passage=4 -2.6 -0.1 -2.0 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 -2.4 -0.3 -1.2 N.D. +0.1
complex community Community=arabino-guar; Passage=4 -1.8 +0.2 -2.4 N.D. +0.6
complex community Community=Locust bean gum; Passage=4 -0.8 -0.5 -2.2 N.D. +0.1
complex community Community=guar; Passage=4 -0.9 +0.1 -2.2 N.D. -0.1
complex community Community=guar; Passage=4 -0.9 +0.2 -2.0 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -1.3 +0.2 -2.0 N.D. +0.3
complex community Community=guar; Passage=4 -2.0 +0.1 -1.0 N.D. +0.3
complex community Community=Locust bean gum; Passage=4 -0.5 +0.1 -1.2 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 -0.1 -0.7 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 -0.1 -0.7 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 -0.2 -0.7 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.8 -0.1 -0.6 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.7 +0.0 -0.5 N.D. -0.1
complex community Community=Locust bean gum; Passage=1 -0.6 -0.3 -0.3 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.7 +0.0 -0.5 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 +0.1 -0.5 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus -0.7 +0.2 -0.5 N.D. +0.0
no phage control no phage control -0.4 +0.1 -0.7 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.1 -0.5 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.9 +0.1 -0.3 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 -0.8 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.0 -0.4 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 -0.3 -0.4 N.D. +0.2
phage phage_bap4 -0.5 +0.2 -0.4 N.D. +0.1
phage phage_bap4 -0.5 +0.4 -0.5 N.D. +0.0
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