Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4485 and GFF4486 are separated by 45 nucleotidesGFF4486 and GFF4487 are separated by 698 nucleotidesGFF4487 and GFF4488 are separated by 134 nucleotidesGFF4488 and GFF4489 are separated by 98 nucleotides GFF4485 - FIG00715336: hypothetical protein, at 128,370 to 130,034 GFF4485 GFF4486 - DksA family protein PA5536 (no Zn-finger), at 130,080 to 130,754 GFF4486 GFF4487 - putative secreted protein, at 131,453 to 132,931 GFF4487 GFF4488 - Metal-binding GTPase YjiA, at 133,066 to 134,121 GFF4488 GFF4489 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191), at 134,220 to 135,434 GFF4489
Group Condition GFF4485 GFF4486 GFF4487 GFF4488 GFF4489
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.1 N.D. +0.0 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 N.D. -0.2 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.8 N.D. -0.1 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 N.D. +0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 N.D. +0.1 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 N.D. +0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 N.D. +0.1 -0.0 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 N.D. -0.2 -0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 N.D. +0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 N.D. +0.2 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 N.D. -0.0 +0.4 +0.2
complex community Community=guar; Passage=4 +0.8 N.D. +0.1 -0.7 -0.1
complex community Community=arabino-guar; Passage=4 +0.5 N.D. +0.1 -0.3 +0.0
complex community Community=Kojac gum; Passage=4 +0.5 N.D. +0.3 -0.5 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 N.D. +0.3 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 +1.4 N.D. -0.2 -0.7 +0.4
complex community Community=Locust bean gum; Passage=4 +1.5 N.D. +0.4 -0.4 -0.4
phage phage_bap4 +0.9 N.D. +0.2 +0.0 +0.2
complex community Community=guar; Passage=4 +1.2 N.D. +0.2 -0.2 +0.1
complex community Community=guar; Passage=4 +1.1 N.D. +0.1 +0.1 +0.3
complex community Community=guar; Passage=4 +1.0 N.D. +0.1 -0.0 +0.6
phage phage_bap4 +1.7 N.D. -0.0 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 +1.4 N.D. +0.4 -0.2 +0.3
phage phage_bap4 +1.6 N.D. +0.2 +0.1 -0.1
phage phage_bap4 +1.6 N.D. +0.2 -0.0 +0.1
complex community Community=Locust bean gum; Passage=4 +1.3 N.D. +1.1 -0.3 +0.1
phage phage_bap4 +3.1 N.D. +0.0 -0.2 -0.2
phage phage_bap4 +3.2 N.D. +0.2 -0.2 +0.0
phage phage_bap4 +3.2 N.D. +0.1 -0.1 +0.1
phage phage_bap4 +3.3 N.D. +0.0 +0.1 +0.0
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