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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4485 and GFF4486 overlap by 4 nucleotides
GFF4486 and GFF4487 overlap by 4 nucleotides
GFF4487 and GFF4488 are separated by 135 nucleotides
GFF4488 and GFF4489 are separated by 223 nucleotides
GFF4485 - RNA polymerase sigma factor cnrH, at 4,479,034 to 4,479,606
GFF4485
GFF4486 - hypothetical protein, at 4,479,603 to 4,480,040
GFF4486
GFF4487 - hypothetical protein, at 4,480,037 to 4,480,318
GFF4487
GFF4488 - Cytochrome c family protein, at 4,480,454 to 4,481,050
GFF4488
GFF4489 - Copper resistance protein CopC, at 4,481,274 to 4,481,654
GFF4489
Group
Condition
GFF4485
GFF4486
GFF4487
GFF4488
GFF4489
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
+0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.4
+0.1
+0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
+0.1
+0.7
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.4
+0.4
+0.1
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.4
+0.3
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.5
+0.4
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.5
+0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.3
+0.4
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.3
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.7
+0.3
+0.5
-0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.4
+0.5
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.3
+0.2
+0.5
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
+0.3
+0.2
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.3
+0.3
+0.2
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.4
+0.5
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.3
+0.6
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.5
+0.5
+0.3
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
+0.5
+0.7
+0.5
+0.2
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