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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4481 and GFF4482 are separated by 45 nucleotides
GFF4482 and GFF4483 are separated by 104 nucleotides
GFF4483 and GFF4484 overlap by 4 nucleotides
GFF4484 and GFF4485 are separated by 93 nucleotides
GFF4481 - hypothetical protein, at 4,474,578 to 4,475,021
GFF4481
GFF4482 - hypothetical protein, at 4,475,067 to 4,475,678
GFF4482
GFF4483 - Copper resistance protein B, at 4,475,783 to 4,477,048
GFF4483
GFF4484 - Multicopper oxidase, at 4,477,045 to 4,478,940
GFF4484
GFF4485 - RNA polymerase sigma factor cnrH, at 4,479,034 to 4,479,606
GFF4485
Group
Condition
GFF4481
GFF4482
GFF4483
GFF4484
GFF4485
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
+0.2
+0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.4
+0.2
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.4
-0.0
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.6
-0.0
+0.5
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.5
+0.3
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.4
+0.1
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.4
+0.2
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.2
+0.3
+0.4
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.6
+0.1
+0.3
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.4
+0.4
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.5
+0.3
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.4
+0.2
+0.4
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.5
+0.3
+0.4
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.5
+0.3
+0.5
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.4
+0.5
+0.5
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.4
+0.4
+0.5
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.5
+0.3
+0.5
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.6
+0.3
+0.4
+0.6
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